KEGG   Callorhinchus milii (elephant shark): 103185383
Entry
103185383         CDS       T03088                                 
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04137  Mitophagy - animal
cmk04140  Autophagy - animal
cmk04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103185383 (hif1aa)
   04137 Mitophagy - animal
    103185383 (hif1aa)
   04148 Efferocytosis
    103185383 (hif1aa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmk03000]
    103185383 (hif1aa)
Transcription factors [BR:cmk03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    103185383 (hif1aa)
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1 PAS PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 103185383
NCBI-ProteinID: XP_042194039
Position
Unknown
AA seq 785 aa
MEDSEMQTDDDTAGQVNPEKKRVSSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHSV
SSHLDKASIMRLTISYLRMRKLLSPRDVEVEPDREKQLNSFYLKALEGFVLVLTQDGDMI
YMSENVNKYMGLTQFELIGHSIFDFTHPCDHEEMREMLSHRQGLQKKGKDQITERSFFLR
MKCTLTSRGRTVNIKSSSWKVLHCTGHIQVHEGSDEQTPCGYKEPPMTCLALVCEPIPHP
SNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQPDELLGRSVYEYYHAMDSDHLTKT
HHDLFSKGQATTCQYRMLSKEGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGVVEKGV
VFSLDQTESVPVTDESPDTIETTGKSYNSPTDQESNDLFNKLKEEPEALTQLAPAAGDTI
ISLDFSPSDSEMQHFPLYNDVMLPSSTEQKPVELSPLPPSDPTKSLCSTTDPALNLEAIT
KLETNPESLELSFTIPQMKEQPNSPSCPSTNQSSPQPSSPSEYCYNVDTDMSNVFKLDIV
EKLFAVDPEAKNPFSVQDVDGLDLEMLAPYIPMDDDFQLRSLDQLSPLTDIQASPPHSQS
VSSIVNLFQSAPKSAKNSTEKYAPALKISLENTESLSASQSSPSPLHMMDEVSSTPGSPY
SKPTSRTASPVRTIGKGLLSEQMDASRSGSPMSPVKPVLTYNKRSAAGGNLQEEVDAKLL
SLHNLQRKRKIENAASLFQAAGIGLLSQNDIIPPVTAPQIWKRAKRSDTTSIATKEKTLA
SLPTV
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggaagactctgaaatgcagacggacgacgacaccgccggtcaggtcaaccccgagaag
aaacgtgttagctcagagcggagaaaggagaagtctcgtgatgctgccaggtgccgaaga
agcaaagaatctgaggtcttttatgagttggcccatcagctgccattgcctcacagtgtc
agctctcacctggacaaggcctccataatgagattgaccatcagctatctgcgaatgaga
aaattacttagtcctagggatgttgaggtggagcctgatcgagagaaacagctcaacagc
ttttacttgaaggccctggagggatttgttttagtgctgacacaggacggagatatgatc
tacatgtctgagaatgtcaacaagtatatgggactaacccagtttgaactgatcgggcac
agcatctttgatttcacgcacccttgtgatcatgaggaaatgcgggaaatgctctcacac
aggcagggacttcagaagaaggggaaggaccagatcacagaacgcagtttcttcttgaga
atgaaatgtacactcaccagccggggccggactgtcaacatcaaatcctcgtcttggaag
gtgcttcactgcacagggcacattcaagtacatgaaggcagtgatgagcagaccccttgt
ggctacaaggagccacccatgacctgtctggcattggtttgtgaacctatcccacaccca
tccaacattgaggtacctctggacagcaagacatttctgagtcgtcacagcctagacatg
aagttttcctactgtgatgagaggataactgaattaatgggatatcaaccagacgaactg
ctgggtcgatctgtctatgaatactaccatgctatggattcagatcatctgactaaaact
catcatgacttgttttctaagggccaggccaccacatgccagtacaggatgttgtccaag
gaaggtggttacgtttgggtcgagactcaggctacagtgatctacaacacaaagaattcc
cagccacaatgcattgtctgtgtgaactatgttttgagtggtgttgttgaaaaaggggtt
gtcttttcactggatcagactgagagtgtacctgtaactgatgagtcacctgacacaatt
gagacaactggcaagagctataattcacccacagatcaagaatctaatgatcttttcaac
aaactgaaggaggagcctgaagctttgactcaacttgcaccagctgcaggcgacacaatt
atctccttggatttcagtccttcagattcagaaatgcagcatttcccactctacaatgat
gtcatgttaccatcctcaacagaacagaagcctgtagagttgtcgccccttcctccctct
gaccccactaagtcgctgtgcagcaccacggacccagccttgaatttggaagcaattacc
aagcttgaaacaaacccagagtcactggaactttcatttaccattccacaaatgaaggag
cagcctaatagcccttcctgtcccagcaccaatcaaagctcaccacaacccagcagtcca
tcagaatactgctataatgttgatacagacatgtccaatgtgtttaaactggatattgtt
gaaaagctctttgcagttgacccagaggccaaaaacccattctctgttcaggatgttgat
ggcttggatttggagatgttggctccatacatcccaatggatgatgattttcagcttcga
tcattggaccaactttcacccctcacagatattcaagccagcccacctcattcacagagt
gtaagcagtattgtgaacctcttccagtcagccccaaaatctgctaagaactccactgag
aaatacgcaccagcgttaaaaatttctttggaaaacactgagtctctctctgcatcccag
tcttccccttctcccctgcacatgatggatgaagtcagtagtactccaggatcaccgtac
agcaaaccaaccagcagaaccgcttctcccgtccgaacgattggaaaaggattgctgtct
gaacagatggatgcttcacgttcaggaagtccaatgtctccagtgaaaccagtgctgact
tataacaaaagatctgcagcaggaggaaacctgcaggaagaggtggacgccaagttgctg
tctttgcacaacttgcagcggaaacgcaagatagaaaatgcagcctctctttttcaagcc
gctggaattgggttgttgtcccagaatgacattattcctccagtgacagcaccgcagatt
tggaagcgtgcaaaaagatctgataccacgagcatcgcaactaaagaaaagacgttggcg
tcgttgcccacagtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (46)   

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