KEGG   Callorhinchus milii (elephant shark): 103186495
Entry
103186495         CDS       T03088                                 
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
  KO
K16474  intraflagellar transport protein 88
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cmk03037]
    103186495 (ift88)
Cilium and associated proteins [BR:cmk03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   103186495 (ift88)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_6 TPR_8 TPR_19 TPR_14 TPR_7 TPR_16 ANAPC3 TPR_11 TPR_17 TPR_9 SNAP TPR_10 TPR-S TPR_15 TPR_MalT DUF2225 RNPP_C MIT Coatomer_E RPN7 FumaraseC_C DUF6584
Other DBs
NCBI-GeneID: 103186495
NCBI-ProteinID: XP_007903763
UniProt: A0A4W3I4Q4
Position
Unknown
AA seq 856 aa
MEHVHLAAVDEEDLYSGYNDYNPTFDTEELENDVAFQQALRTSHGRRPPMTAKIPGSAIG
ARPFGTMLAARLPLSSSMGRPVTGAIQEGVGVARPMTAVRAAGYSSAAIRGSAFDPLGQS
RGPAPPLETKNEDTPEEKVKQLEKTVNELVEESCIANSRGDLQLALEKAKEAGRKERILV
RQREQTASADHINLDLTYSVLFNLASQYAANDMYAEALNTYQVIVKNKMFNNAGRLKVNM
ANIYFKQRNYPKAIKFYRMALDQISSSHKEMRIKIMQNIGVVFVKMGQYSDAITSFEHIM
SESPNLKTSFNLILCYFAIGDREKMKKAFQKLIVVPLSIDEDDKYIPPNDDPHMNLVIEA
IKNDSLRQMERERKAMAERFIMTAAKLIAPAIETSFAAGYDWCVEMVKASQYVELANDLE
INKAITYLRQRDFNQAVETLKMFEKKDSRVKSAAATNLSFLYFLENDFGLADRYADLAMN
ADRYNPAALTNKGNCVFANSDYEKAAEFYKEALRNDSSFTEALYNLGLTYKKLNRLEEAL
DCFLKLHAIMRNNAQVMYQIASLYEMLEDPTQAIEWLMQLISVAPTDPLALAKLGDLYDN
EGDKSQAFQYYYESFRYFPSNIEGIEWLGAYYIDTQFCEKAIQYFERAALIQPTQVKWQL
MVASCYRRSGNYQKALETYKDIHRKFPDNVECLRFLVRLCTDMGLKEIQEYATRLKKVEK
MKEIREQRVKSGRDGSARGRREGSASSGSTPPGILGTSRNPAAFSPESRHSPLVDQIRDS
TQSTHGTSAKGERMNAKLRSLHGVNDQYETSNNKDIDASYVDPLGPQIERPKTAARKRVD
EDEFADEELGDDLLPE
NT seq 2571 nt   +upstreamnt  +downstreamnt
atggagcacgtgcacttggcagcggtggatgaagaagatctctattcaggatacaatgac
tataatccaacatttgatacagaggaattagaaaatgatgtggcttttcagcaagccttg
aggaccagtcatggaaggagaccccctatgactgctaaaataccaggttctgcaataggt
gcccgtccttttggaactatgttggcagcaagattgcccttgtcatcatcaatgggtaga
cctgtaactggtgctattcaggaaggagttggtgttgctcgacccatgacagcagtgcgt
gcagctggctattcatcagcagccatcagaggttcagcatttgatccactgggacaatca
agaggtcctgcacctcctttggaaacaaagaatgaagatacgccagaagaaaaggttaag
cagttagagaagactgtgaatgaattggttgaggagagttgcattgctaacagccgcgga
gacttacaactggctttggaaaaagcgaaagaagcgggaagaaaagaaaggatactggta
agacagagagaacaaacggcatctgcagatcacattaatctggatcttacctattcggta
ctcttcaatttagccagtcagtatgcagccaatgatatgtatgcagaagcattaaatacc
tatcaggtgatagtaaagaataagatgttcaataatgcaggtcggctaaaggtaaacatg
gcaaacatttacttcaaacaaagaaattatcccaaggcaataaaattctaccgaatggcg
ttggatcagatatcaagttcccataaggagatgaggattaaaataatgcagaacattggt
gttgtattcgtcaaaatgggacagtactctgatgctatcacctcctttgagcacattatg
agtgaaagtccaaatttgaaaacaagctttaacctcattctgtgctactttgccattggt
gatcgggaaaagatgaaaaaagcattccagaaattgatagtggttccacttagcattgat
gaagatgataaatacatcccaccaaatgatgatccacatatgaatttggttattgaagct
ataaagaatgactcactgagacaaatggagagagaaagaaaagcgatggcagaaagattc
atcatgacggcagctaaattgatagcacctgcgattgagacatcctttgccgctggatat
gattggtgtgtggaaatggtgaaggcatcgcagtatgttgaactggctaatgacttggaa
attaataaagctattacatacttgagacaaagggactttaaccaggctgtggagacgcta
aaaatgtttgagaagaaggacagccgggttaagagcgcagctgcaacaaacctctctttc
ctttactttttggaaaatgattttggacttgcggaccgatacgcagacctcgctatgaat
gctgatcgatataacccagcagcactgacaaataaagggaactgtgtctttgcgaatagc
gactatgagaaagcagcagagttctataaagaagccttgcggaatgactcctcttttacc
gaggcattgtacaatttaggactcacttacaagaaattgaatagactggaggaagccttg
gattgctttttaaagcttcatgcaatcatgaggaacaatgctcaagttatgtaccagatt
gcaagtctatatgaaatgttggaggatccaactcaagctattgagtggcttatgcagttg
attagtgttgctcccactgatcctctggcactggctaaattgggggatttgtacgacaat
gagggagacaagtcccaggcatttcagtactattatgagtcatttaggtacttcccatcg
aacattgagggcattgaatggcttggagcctactacatcgatacgcagttctgtgaaaaa
gctattcagtattttgaaagagcagcacttatccaaccaactcaagtgaaatggcagcta
atggtagcaagctgttacaggagaagtggtaattaccagaaggcattggaaacttataaa
gacattcatcggaaatttccagataatgttgaatgtttacggttcctggttcgtctctgc
acagatatgggactgaaagagattcaagaatatgccacaagactcaagaaagttgaaaaa
atgaaggaaataagagaacagcgagtgaagtctggcagagatgggagtgcacgtggacgc
agagaaggcagtgctagtagtggatcaacacctccaggaatcctaggcaccagcagaaat
cctgctgccttctcgcctgaaagcaggcacagtccattagtggatcagattagggacagt
acacaaagcacccatggtaccagtgctaaaggagagcggatgaatgccaagctgaggtca
ctccatggagttaatgatcagtatgaaaccagcaataacaaagacatagatgcatcgtat
gtggatccacttggcccacaaatagaacggcccaaaactgcagcaagaaaacgggttgat
gaggatgaatttgcagatgaagaactgggagacgatttgctgccagagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (25)   
   Pfam (25)   
All databases (60)   

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