KEGG   Callorhinchus milii (elephant shark): 103191530
Entry
103191530         CDS       T03088                                 
Symbol
tubb1
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04145  Phagosome
cmk04540  Gap junction
cmk04814  Motor proteins
cmk05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103191530 (tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    103191530 (tubb1)
  09142 Cell motility
   04814 Motor proteins
    103191530 (tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103191530 (tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmk03036]
    103191530 (tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cmk04812]
    103191530 (tubb1)
   04147 Exosome [BR:cmk04147]
    103191530 (tubb1)
Chromosome and associated proteins [BR:cmk03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     103191530 (tubb1)
Cytoskeleton proteins [BR:cmk04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    103191530 (tubb1)
Exosome [BR:cmk04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103191530 (tubb1)
  Exosomal proteins of colorectal cancer cells
   103191530 (tubb1)
  Exosomal proteins of bladder cancer cells
   103191530 (tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 103191530
NCBI-ProteinID: XP_007910717
Position
Unknown
AA seq 450 aa
MREIVHIQIGQCGNQIGSKFWEVISDEHGIDPKGNYVGDSDLQLERISVYFNEAHAKKYV
PRGILVDLEPGTMDSIRGSHIGQLFKPDNFIHGNSGAGNNWAKGHYTEGAELMENVMDVL
RNECENCDCLQGFQFTHSLGGGTGSGMGTLIMNKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRSLKLATPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYCTLTVPELTQQMFDPRNMM
TACDPRHGQYLTVAVIFRGEXSTKEVDEQMLSVQTRNSSNFVEWIPNNLKVAVCDIPPRG
LKMSSTFIGNNTAIQELFKRISEQFSLMFRRKAFLHWYTAEGMDEMEFTEAENNTNDLVS
EYQQYQDATADLNEEEYEEEEFEVENTKEI
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagatcgttcacatccagatcggccagtgcggcaaccagataggatcaaagttc
tgggaagtgattagtgatgagcacggaattgatcctaaagggaattatgttggtgactcg
gacctccaacttgagaggatcagtgtgtatttcaatgaggcacatgctaaaaagtatgtg
cccagaggaatcctagtggacctagaacctggaacaatggacagcatccgcggcagtcac
atcggccagctcttcaaaccagataacttcatccatggtaattcaggtgctggaaacaac
tgggccaaaggtcactacacggaaggtgctgagctgatggagaatgtgatggatgtcttg
aggaatgagtgtgagaattgcgattgcttgcagggcttccaattcactcactctctgggc
ggaggcacaggctctggcatgggcactctcatcatgaacaagatccgggaggaatacccc
gacaggatcatgaacaccttcagcatcatgccctccccgaaagtctccgacaccgtggtg
gagccgtacaacgccatcttgtccattcaccagctgatagagaacacggacgaaaccttc
tgcatcgacaacgaggctctgtacgacatctgtttccgctccctgaagctggccaccccc
acctacggcgacctcaaccacctggtctccatgacgatgagtggcgtgaccacctcgctg
cgcttccccggacagctgaacgcagacctgaggaagctggccgtcaacatggtgcccttc
ccccgcctgcacttcttcatgccgggcttcgctccgttgacctcccgcggcagccagcag
tactgcactctcaccgtgcccgagctgacacagcagatgtttgacccaaggaacatgatg
acggcttgcgacccacgccatggccagtacctgaccgtggccgtcatcttcaggggagaa
ntgtccaccaaggaggtggacgagcagatgttgtccgttcagaccaggaacagcagcaat
tttgtggagtggatccccaataacctcaaggtggccgtgtgtgacatcccgccccgcggc
ctcaagatgtcctccaccttcatcgggaacaacacggccatccaggagctcttcaaacgc
atctcagagcagttctcattaatgttcaggaggaaggcttttctgcactggtacacggcc
gagggcatggacgagatggagttcaccgaggccgagaacaacaccaatgacctggtgtcg
gagtaccagcaataccaggatgccacggccgacctgaacgaggaagagtatgaagaggaa
gagtttgaggtcgaaaatactaaagaaatataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (234)   
   KEGG ORTHOLOGY (1)   
   RefGene (230)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (250)   

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