KEGG   Chlamydia muridarum Nigg3 clone G0.1.1: NC80_03915
Entry
NC80_03915        CDS       T03404                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
cmm  Chlamydia muridarum Nigg3 clone G0.1.1
Pathway
cmm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NC80_03915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmm03021]
    NC80_03915
   03019 Messenger RNA biogenesis [BR:cmm03019]
    NC80_03915
Transcription machinery [BR:cmm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NC80_03915
Messenger RNA biogenesis [BR:cmm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NC80_03915
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 OB_RNB Mor AAA NACHT DUF5855 Spore_III_AA
Other DBs
NCBI-ProteinID: AIT90932
UniProt: A0A097KIC0
Position
complement(919010..920404)
AA seq 464 aa
MKEESPAEVLHKVKEHKRREGPLPLGKEGSEDSAVATEEKEAPRPVAVTKIAKLQRMGIN
ELNVLARQYGVKNVGSLTKSQVVFEIVKAKSERPDEFLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIVGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLHPNERLIMEMGKENLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDAELIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPDRHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRHLSDRRIYPAIDLIKSGTRKEELLYHP
GELEKVRLFRQAIAGLTAIDAMQLLLGRLKKTNSNTEFLLSLKD
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaaagaagaaagtccagccgaggtcttacacaaggtaaaggagcataagaggcgcgag
ggtcctttaccattgggaaaagaaggtagtgaagacagtgctgttgctacagaagagaaa
gaggccccgcggccagtggcagtgacaaagattgctaaactacaacgcatgggcattaat
gagctgaatgttttagcgcggcaatatggggtgaagaatgtaggttccctgacgaaatcg
caggtagtgttcgaaatcgttaaagctaagtctgaacgtcctgatgagtttttgattggt
gagggagttttagaagttctcccagatggctttgggtttctgagatctcctacatacaac
tatcttccttctgcagaggatatttatgtttctccagcgcagattcgtcgttttgatttg
aagaaaggagatactatcgttggaacgatccgttctcctaaggagaaagagaagtatttt
gctttattgaaagtagataaaatcaacggttcgactcccgataaagcgaaagaaagagtt
ttatttgagaacttaaccccactgcatcctaatgagcggttaatcatggagatggggaaa
gaaaacctggcggagcgtgtattggatttaacagctccaattggtaagggacaacgaggg
ctgattgtggctccgcctcgttccgggaaaacagtgattttgcagagtattgcgcacgcc
attgctgtaaataatcctgatgcagagctcattgtattactgattgatgagcgtcctgaa
gaagttactgatatgattcgtcaggttcgaggtgaagttgttgcatcgacttttgatgaa
cagcctgatcgacatattcaagttgctgaaatggtaattgaaaaggcaagacgtttagtt
gagcacggtaaagatgttgtgattttactagattctattacgcgtttagctcgtgcatat
aacactgtgcaaccacattcaggaaaaatcctcactggaggggtagatgccagtgcctta
cataaacctaagcgtttctttggtgcggctagaaatattgaaggtggtgggtctctaacg
attttagccacagcgttaattgatacggggtcaagaatggatgaggtgatctttgaggaa
ttcaaaggaaccggaaacatggaattagttcttgatcggcacctttctgatcgtagaatt
tatcctgctattgatttgattaagagcggaacacgaaaagaagaattgctataccatcca
ggagagttagagaaagtgcggctgttccggcaggctatagctggcttaacagcaatagat
gcaatgcagttgcttcttggtcggttgaaaaagacaaatagcaacacagagtttctattg
tcattaaaggattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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