KEGG   Cucumis melo (muskmelon): 103488187
Entry
103488187         CDS       T03195                                 
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
  KO
K12590  exosome complex component RRP46
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103488187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103488187
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103488187
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 103488187
NCBI-ProteinID: XP_008445020
UniProt: A0A1S3BB90
Position
3:complement(27659134..27664156)
AA seq 243 aa
MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI
NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNTPVSVVP
EGSTQGVGEPLEHGMITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLSMDSS
KAG
NT seq 732 nt   +upstreamnt  +downstreamnt
atggagatagacagagatgatggtcgtactcctaaccagttgagaccacttgcttgttct
tgcaacgttcttaatcgtgctcatggctccgccagttggtcccaaggtgatacgaaggtt
cttgctgcagtctatggacctaaagcgggaacgaagaagaatgaaaatcctgagaaggct
tcaattgaggttatatggaaacccaagacagggcaaattggaaaactggaaagggagtgt
gagatgatattaaagcggacattgcagagtatttgcatattaactactaatcccaatacc
accacatctattattgttcaggttattcatgatgatggagctcttcttccttgtgctatt
aatgcatcatgtgctgcccttgtagatgctggaattcctttaaagcatcttgctgttgcg
atttcctgttgtttgtctgagaatggatatgttattttggatccaaccaagatagaggag
gagaaaatgaaggcatctgtgcatttggtcttcccaaacacgcctgtctcagtagttccc
gaaggatctacacaaggtgtaggtgaaccactggagcatggaatgatcacatctgtaact
cagggtgcaatgtcagtggatgattatattcactgcctggaacgggggcgtgctgctact
acaaaaatgtctgcttttctgaggagaagtttgcagccccaactctcaatggattcctca
aaagctggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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