KEGG   Cucumis melo (muskmelon): 103488767
Entry
103488767         CDS       T03195                                 
Name
(RefSeq) thioredoxin-like protein YLS8
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103488767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmo03041]
    103488767
Spliceosome [BR:cmo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103488767
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_7 DUF3192 Thioredoxin_8
Other DBs
NCBI-GeneID: 103488767
NCBI-ProteinID: XP_008445881
UniProt: A0A1S3BEF1
Position
10:complement(5228100..5230563)
AA seq 142 aa
MSYLLPHLHSGWAVDQAILAEEERVVIIRFGHDWDDTCMQMDEVLASVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgtaccttctaccgcatttgcattcaggatgggctgtggatcaagccattctcgct
gaagaagaacgtgtcgtcatcatccgtttcggccatgattgggacgacacctgtatgcag
atggatgaagtgttggcctcagttgcggagacaattaagaactttgcagtaatatacctt
gtggatatcacagaagttcctgatttcaacacaatgtatgaactgtatgatccttccacc
gtcatgttcttctttaggaacaagcacataatgattgatcttggtactgggaacaacaat
aagataaattgggcactcaaggataaacaagagttcattgatattgttgaaacagtttat
cgtggagcaaggaaaggacgtggtttagtcattgcacctaaggattattcaaccaaatat
cgctactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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