KEGG   Cucumis melo (muskmelon): 103496444
Entry
103496444         CDS       T03195                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07889  Ras-related protein Rab-5C
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo04144  Endocytosis
cmo04145  Phagosome
cmo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103496444
   04145 Phagosome
    103496444
   04148 Efferocytosis
    103496444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmo04131]
    103496444
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmo04147]
    103496444
   04031 GTP-binding proteins [BR:cmo04031]
    103496444
Membrane trafficking [BR:cmo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    103496444
 Endosome - Lysosome transport
    103496444
Exosome [BR:cmo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103496444
  Exosomal proteins of other body fluids (saliva and urine)
   103496444
  Exosomal proteins of colorectal cancer cells
   103496444
  Exosomal proteins of bladder cancer cells
   103496444
GTP-binding proteins [BR:cmo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    103496444
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 103496444
NCBI-ProteinID: XP_008456515
UniProt: A0A1S3C444
Position
3:complement(23502628..23506612)
AA seq 199 aa
MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD
NINELFEEIAKRLPRPTSS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctctgtcccagacagggcttctgggcgatcgggtgggcttaatcca
gagaacagtgcagctgattccaagaatttacgcgtcaagcttgtcctgctaggtgattct
ggtgtcggtaaaagctgtattgttcttcgctttgtccgtggtcagtttgatccaacgtct
aaggtaactgttggagcatcattcttatcacaaacgatagctcttcaagattccacaacg
gtgaagtttgaaatatgggatactgctgggcaagagaggtatgctgcattagcaccactt
tactatagaggtgctgcagttgcagttattgtatatgatataacaagctccgattccttt
gccaaagcacaatattgggttaaggagctacagaagcatggcagccctgatatcattttg
gcattggttggtaacaaagctgatcttcaagagaaaaggaaagtatctgttcaggatggg
acagagtatgcagagaagaatggaatgttctttattgagacatctgcgaagactgcggat
aatataaatgagctgtttgaggagattgcgaagcggttgccacgaccaacttcctcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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