KEGG   Cucurbita moschata (crookneck pumpkin): 111430561
Entry
111430561         CDS       T05248                                 
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    111430561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmos04121]
    111430561
   03036 Chromosome and associated proteins [BR:cmos03036]
    111430561
Ubiquitin system [BR:cmos04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111430561
Chromosome and associated proteins [BR:cmos03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     111430561
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 111430561
NCBI-ProteinID: XP_022922603
UniProt: A0A6J1E766
Position
Unknown
AA seq 339 aa
MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD
SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggaaaacgccgccccaagatccgaattcatggccacctacgattccccgcaccctctc
tatgccatggccatctcttccgcccacacccactctcgcactttccccaatcgcatagcc
cttggtagcttcatcgaacagtgcaccaaccgtgtcgacattgtgtcttttgatccagat
tccctctccattcaaacgcatccttctctctccttcgaccacccctacccacccaccaag
ctcatgttcaatcccgatgccctctcctctctccgcaactcctccgacatcttggcctcc
tccggcgactatctccgcctctggcaagttggagattcttctatcgaacccctctctgtc
ctcaacaacagcaaaaccagtgaattctgcgcccccttaacttccttcgactggaatgaa
gtcgagcccaagagaattggaacctccagcattgataccacttgcactatttgggatatt
gagaagagcgtggttgaaacccagttcatagctcacgacaaagaggtttatgacattgcg
tggggggaagcccgagtttttgcctccgtttccgctgatgggtcggtcaggattttcgac
ttgagagataaagagcactccaccattatatacgaaagcccccaacccgatacccctttg
cttagactggcttggaacaagcaggacctgcggtacatggccacaattttgatggacagc
aacaaagttgttattttggacattcgctcgccaagtgtgccggttgctgagctggagagg
catcattccagtgtcaatgccattgcctgggctccacggagctgcagacatatttgctcc
gctggggatgacaaacaggcgcttatttgggagttgccaatggttgcaggcccgaatggc
attgatccaatgtccatgtattctgctgcacatgaaattaaccagttgcagtggtccgcc
gcccagcctgattggattgctctggcgttttctaacaagatgcagcttttgaaagtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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