KEGG   Cucurbita moschata (crookneck pumpkin): 111431514
Entry
111431514         CDS       T05248                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111431514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmos03041]
    111431514
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111431514
Spliceosome [BR:cmos03041]
 Complex B
  Other components
   Prp19 complex
    111431514
 Complex C
   Prp19-CDC5 complex
    111431514
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111431514
SSDB
Motif
Pfam: BCAS2 SOGA
Other DBs
NCBI-GeneID: 111431514
NCBI-ProteinID: XP_022923949
UniProt: A0A6J1EDE4
Position
Unknown
AA seq 256 aa
MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN
DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE
KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW
NLEVNVENGSVSFPVS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggcgatcaacaacaatagcggggatatcctgatgctcgaggctccaccgcagccatct
caaccagcgtggcgcgtttctgcagatgcggaggtaatcgacgccttgccctacatcgac
gatgactatgcggacccaagggtcaaagcagaggtcgatcgattagtggaggaagagatg
cggcgcagctccaagcgacctgccgattttctcaaagacttgcctcctcttcccaagttc
aaatttgaggatcatccaatgcttgcgagagagtatgaacgtgtaagagctgggaggcct
ccaatgcctctcgatgttgctagatataaattagagacaccgcctccaaataaaaagaat
gacgaaactgcttggaagcagacacttcagagagctcaatgcctactccagcatcaagtg
ctgaggctggaaaatttggaactgatgtcaaaatatgcccctgatatctggaagcaacac
aacaaacagttggaagcacttctatcaagaatgcaaaaattagctcaagaacagaatgag
aagattgaaaaagtgaaccgtgaaaggaaattccatcaacaaaacgctgcatatgagctt
catgctttgtccacacaatggaaggagctgtgcgagaaaaatatggaaatccaagtggca
tgctctcaaatagagggtcaaatccaggaactaaggagtgaggcagcagaaaaaggctgg
aatttagaagtcaatgtagagaatggttctgtttcgttcccagtgtcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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