KEGG   Cucurbita moschata (crookneck pumpkin): 111433144
Entry
111433144         CDS       T05248                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111433144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmos03041]
    111433144
Spliceosome [BR:cmos03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111433144
 Complex B
    111433144
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 111433144
NCBI-ProteinID: XP_022925862
UniProt: A0A6J1EGF6
Position
Unknown
AA seq 314 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE
QAANALQNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRRLFGRSRRRRSRSQSQSRSPHRHHGHDDRPHGGRGRGPSRRDGDKDPRYHDRSRRPRS
RSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDRETADNGSGHQDVKDDGGSNG
LVQNEDEFDPSKQY
NT seq 945 nt   +upstreamnt  +downstreamnt
atggcggaacatttggcttcaattttcggaacggaaaaggatagggttaactgccccttc
tacttcaagattggagcctgtagacatggagatcggtgctctcggcttcacaccaagccc
agcatcagccctacacttctcctctctaatatgtatcagagacctgacatgatcaccccc
ggtgttgacccgcagggccaagcccttgatccgcgcaaggttcaagaccacttcgaggac
ttttatgaagatctattcgaggagctgagcaaatatggagatctcgaaagcttaaatatt
tgtgataatttggctgaccatatggtgggcaatgtctatgttcagtttagggaagaagaa
caagctgcaaatgcgcttcagaatcttaatgggcgcttttatgcaggtcgacccatcatt
gttgacttctctcctgtgacggattttcgagaagctacttgcaggcaatatgaggaaaat
gtatgtaatcgtggtggctattgcaactttatgcatctgaagaagataagcagagagttg
agaaggcgtttatttgggaggagcagacgcaggcgtagccgaagccaaagtcaaagtcga
agcccccacaggcatcatggacatgatgaccgtccccatggtggtcgtggacgtggacct
agtagaagagatggagacaaggaccctcggtatcatgatagaagcaggaggcctagaagc
cgtagccctaggcatagagggggacggagtaggagccctggagggaggaggaatagaagt
ccggtgagggaaagtagtgctgaaagaagggctaagattgaacagtggaacagggacagg
gaaacggcagataatggtagtggtcaccaggatgtcaaggatgatggtggtagcaatggc
cttgtacaaaatgaagatgaatttgatccttctaagcagtactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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