KEGG   Cucurbita moschata (crookneck pumpkin): 111440826
Entry
111440826         CDS       T05248                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022  Basal transcription factors
cmos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111440826
  09124 Replication and repair
   03420 Nucleotide excision repair
    111440826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmos03021]
    111440826
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111440826
Transcription machinery [BR:cmos03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     111440826
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     111440826
SSDB
Motif
Pfam: MAT1 NAD_binding_9
Other DBs
NCBI-GeneID: 111440826
NCBI-ProteinID: XP_022933397
UniProt: A0A6J1F4M5
Position
Unknown
AA seq 189 aa
MVVSSGVSHSKEISIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVQAIE
AKIARYQEENAEQIMVNRARKAEEYAAALAASKGIPAQTDNDVAADQSFQAGLSTGTQGQ
YAPTFAGGQPRPTGQPVPLGGGLDMQGYGLDDEEMLRLRAERGGRAGGWSVEFSRKRALE
EAFGSIWIC
NT seq 570 nt   +upstreamnt  +downstreamnt
atggttgtctccagcggtgtttctcatagtaaggaaatcagtatcaggaggaggattgct
agcatattcaacaagagagaagatgatttcccatccctgagagagtacaatgattatctg
gaagaagtggaggacatgacttttaacttgattgaaggcatagatgttcaagctattgaa
gcaaaaattgctagatatcaagaagaaaatgccgaacaaataatggtcaaccgagctcgc
aaggctgaagaatatgctgcagcccttgcagcaagcaagggaattcccgcacagacagac
aatgatgtggctgcagatcaaagcttccaagcaggattaagcacaggcacacaaggtcag
tatgcacctacatttgctggagggcagccacgacctacaggccaacctgtgccccttggt
ggcggtcttgacatgcagggctatgggcttgacgatgaggaaatgttgaggcttagagcg
gagagaggtggaagggccggtgggtggagtgtagagttcagcagaaagcgtgcacttgaa
gaagcgtttggaagtatttggatctgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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