KEGG   Cucurbita moschata (crookneck pumpkin): 111440842
Entry
111440842         CDS       T05248                                 
Name
(RefSeq) cell division cycle 5-like protein isoform X1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111440842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmos03041]
    111440842
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111440842
Spliceosome [BR:cmos03041]
 Complex B
  Other components
   Prp19 complex
    111440842
 Complex C
   Prp19-CDC5 complex
    111440842
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111440842
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 111440842
NCBI-ProteinID: XP_022933423
UniProt: A0A6J1F4P7
Position
Unknown
AA seq 1023 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRHRKRKRKGIDYNAEIPFEKRPPPGFFDVGEEDRPVEQPKFPT
TIEELEGKRRIDVESQLRKQDIAKNKIAQRQDAPSAVLQANKLNDPEMVRKRSKLMLPAP
QIADHELEEIAKMGYASDLLAGNEVLAEGSGATRALLANYAQTPRQGMTPFRTPQRTPAG
KGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGG
AGLTPRSGMTPARDAYSFGVTPKGTPIRDELHINEDMDTHDSAKLESQRQADLRRNLSLG
LGNLPQPKNEYQVVMQPIPEDKEEPEEMIEEDMSDRIARERAEEEARQQALLRKRSKVLQ
RELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLSLLEHDNVKYPIDE
KVNKEKKKGSKRTGNRPAAAIPTIDDFEETEMQEADYLIKEEARYLCVAMGHENEPLEEF
VEAHKTCLNDLMYFPTRSAYGLSSVAGNHEKLAALQDEFEYVKKKMDDDTEKAVRLEKKV
KVLTHGYETRSKQSLWPQIEATFKQIDTAATELECFEALKKQEMSAASHRISGIWEEVQK
QKELERTLQLRYGNLFADLEKMTKIMDERKAQALKEEEIAAENRALQLAEAEANRTVGEN
ADSSEAVFALAVDGENSMPPNELAGEQQNSSLGHEHEGSNAMDIDAEKESVAVSSDIGLP
DDKLPSAVAENDASSSDKAFDDSDKSQTIDVPSQELVVPPANGTPDVPGTVENKISNDLV
DGTAPIENAECGTDIVKEGKDVETQQPVIEAGNSDVNSTNLDSSNNDVVELPRGDEEATG
SNV
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgaggattatgataaaaggtggtgtttggaagaacaccgaagatgagatccttaaagct
gcggttatgaaatatggaaaaaaccagtgggctcgaatctcgtcgcttcttgttcggaaa
tctgctaagcagtgtaaggctcgatggtatgagtggcttgatccttccattaaaaagact
gagtggacaagagaggaggatgagaaactactccatcttgctaagctcatgccaacccag
tggagaactattgcaccaattgttgggcgtactccatcccagtgcctcgagcggtacgag
aagcttcttgatgctgcttgtgttaaggatgagaattacgaaccaggagatgacccaaga
aaattgcgcccgggagaaattgacccaaacccagaatcaaagcctgcacgtcctgatcct
gttgacatggatgaagatgaaaaggaaatgctttctgaagcacgagccaggttagcaaat
actaggggaaagaaggcaaaaaggaaagccagagagaaacaacttgaagaggccaggagg
cttgcttcgctacaaaaaagaagagagctgaaagctgcagggattgatactcgacatcgg
aagagaaagagaaaaggaatagattacaatgctgaaattccttttgagaagaggcctcct
ccagggttttttgatgttggtgaggaagatagaccagtggaacaacccaagtttccaaca
acaattgaagaacttgaaggcaaaagaaggattgacgtagaatctcaattaagaaagcaa
gatattgcaaagaataaaattgcgcagaggcaagatgctccatcagctgtactgcaggca
aataagctgaatgatccagagatggtgaggaaaagatctaaacttatgcttcctgcacct
caaattgcagaccatgaattggaggaaattgcaaagatgggatatgccagtgatcttctt
gctggtaatgaagtgcttgcagaaggaagtggggctacacgagctctgcttgcaaattat
gcacagacaccacgacaaggaatgacaccctttcgaactccccaaaggacaccggctggg
aagggtgatgctataatgatggaggctgaaaaccttgctaggctgagagaatctcagact
ccattattgggaggagagaacccagagctgcatccttcagatttttcaggggtcacccca
aggaaaaaagagattcaaacaccgaatcccatgctaacaccctcagcaactcctggtggt
gctggtctcacacctcgtagtggcatgacaccagctagggatgcttactcctttggtgtg
actcccaaaggaacgcctattagagatgagttacatatcaatgaagacatggacacacat
gatagtgcaaaactagagtctcaaagacaagctgatttgaggaggaatcttagcctagga
ttaggcaatcttccacagcctaagaatgagtaccaggtagttatgcaaccaattccagaa
gataaagaagaaccagaggagatgattgaagaggacatgtctgacaggattgctagagaa
cgagcagaggaagaggcaaggcagcaggctttgcttaggaaaagatcaaaagtgctacag
agggagcttcctcgacctcctactgcttctttggaacttattagaaattctttgatgaga
gctgatggagacaagagctcatttgttccacctacccctattgagcaggctgatgaaatg
ataagaaaggagcttctttctttactagagcatgataatgtgaagtacccaatcgatgaa
aaggtcaacaaggagaaaaagaaaggttccaaacgcacaggaaatagacctgctgcggcc
atccctaccatagacgattttgaagaaactgagatgcaagaggctgattatttgataaag
gaagaggctcggtatctgtgtgttgcaatggggcatgaaaatgaacccttagaggaattt
gtggaagctcacaaaacgtgcttgaacgatcttatgtatttccccactaggagtgcatat
ggactttccagcgtggctggcaaccatgagaaactagccgccctgcaggatgaatttgag
tatgttaaaaagaaaatggatgatgatactgagaaggctgtccggctggagaagaaggtt
aaagttctcacgcatggctatgagacacggtcaaaacaaagcctttggccgcaaattgag
gcaactttcaagcagatagacactgcagcaacagagctggagtgctttgaagctcttaaa
aagcaagagatgtcagctgcttcacacaggattagtggtatctgggaggaggttcagaaa
caaaaagagctggagagaactctgcagctacgttatgggaacctttttgcggacttggaa
aagatgacgaaaatcatggacgagcgcaaggcacaggcactaaaggaagaagaaattgca
gcggagaaccgtgctcttcagttggccgaggctgaggctaatcgaactgtaggagaaaat
gctgatagttctgaagctgtgtttgcgttagcagttgatggtgaaaattctatgcctccc
aatgaattagcgggtgaacaacaaaactcttccttgggacatgaacatgaaggttctaat
gccatggatatcgacgcagagaaagaaagtgttgcagtgagctcggatattggtttacct
gatgacaaactaccttctgcagtggcagagaatgatgcatcatcgtctgacaaggctttc
gatgattctgataagagtcaaaccatcgacgttccttcacaagaactcgtggtccctcct
gctaatggcactccagacgtgcccggtacagtggaaaataagatcagcaatgatttggtt
gatggaactgctcctatcgaaaatgctgaatgtggtaccgatattgtcaaggaaggtaaa
gatgtcgaaactcagcaacctgtgatcgaagctggaaactcggatgtgaattcgactaat
ctggattcttctaataatgatgtcgtagaactccctcgtggcgacgaggaagcaacggga
tcaaatgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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