KEGG   Cucurbita moschata (crookneck pumpkin): 111445072
Entry
111445072         CDS       T05248                                 
Name
(RefSeq) ras-related protein RABF1-like
  KO
K07889  Ras-related protein Rab-5C
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04144  Endocytosis
cmos04145  Phagosome
cmos04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111445072
   04145 Phagosome
    111445072
   04148 Efferocytosis
    111445072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmos04131]
    111445072
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmos04147]
    111445072
   04031 GTP-binding proteins [BR:cmos04031]
    111445072
Membrane trafficking [BR:cmos04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111445072
 Endosome - Lysosome transport
    111445072
Exosome [BR:cmos04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111445072
  Exosomal proteins of other body fluids (saliva and urine)
   111445072
  Exosomal proteins of colorectal cancer cells
   111445072
  Exosomal proteins of bladder cancer cells
   111445072
GTP-binding proteins [BR:cmos04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111445072
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA MMR_HSR1 GTP_EFTU DUF6806 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 111445072
NCBI-ProteinID: XP_022939060
UniProt: A0A6J1FLK7
Position
Unknown
AA seq 215 aa
MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
NINELFEEILSDCYDQLPCDLATTLMLLSAASSPR
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggctcctcctcctctgtccctggcagggcttctggaggatcagggcggcttaatcca
aagaacagggcagctgattccaagaatttgcgcgtcaagcttgtcctgttaggtgattct
ggtgttggtaaaagctgtattgttcttcgctttgtccgtggtcagtttgatccgacgtct
aaggtaactgttggagcatcgttcttgtcacaaacgatagttttacaagattcgacgaca
gtgaaatttgaaatatgggataccgctgggcaagagaggtatgctgcattagctccactt
tactatcgaggtgctgcagttgcagttgttgtatatgatataaccaactcagattcattc
gccaaagcaaaatattgggttaaggagctacagaagcatggccgctctgatatcattttg
gcattggtcggtaacaaagctgatcttcaagaggaaaggaaagtatcagttcaggatggg
actgagtatgcagagaagaatggattgttctttattgagacatctgcaaagactgcagat
aatataaacgagctgtttgaggagattctaagcgattgctacgaccaacttccttgtgat
cttgctacgacattaatgcttttgtcagcagcttcatctcccaggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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