KEGG   Cucurbita moschata (crookneck pumpkin): 111449983
Entry
111449983         CDS       T05248                                 
Name
(RefSeq) probable pectate lyase 18
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040  Pentose and glucuronate interconversions
cmos01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111449983
Enzymes [BR:cmos01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     111449983
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 111449983
NCBI-ProteinID: XP_022945874
UniProt: A0A6J1G261
Position
Unknown
AA seq 502 aa
MFPVLSILLIWMSGLFFLVASASFNLTLPHQHPDPDSVADELQRTVNASISRRKALSIES
KDQAFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSNP
ENPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINNFKTIDGRGANVHITGGGCITIQ
YVSNIIIHNIHVHHCVPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYVAPVNPNAKEVTRRLDAAETEWTA
WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSTEPKSVALINQLTMNAGVLGAPRYSNGE
GIVYPGFSGSTGGGNGGYGGGTVINNSPMYGNSGGGEDDFYGMIFKGGGNRVSPPWSPPM
ILCVQILVVLYVVTNNSGLLTL
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgtttcctgttcttagcattctcttgatatggatgtctggtttgttctttcttgtcgct
tcggcttctttcaatctcacattgccccaccagcatcctgaccctgattctgttgctgat
gaacttcaaaggacagtcaatgcatcgatatcgagaagaaaagcgctatccatcgaatca
aaggatcaagccttctcttgcctcaccggaaaccccatagacgattgctggcgttgcgac
ccgaattgggcggcgaaccggcagagactcgctgactgcggcatcgggttcggccgcgac
gccatgggtggcaaaggcggcaagatctacatcgtcaccgactcctcagattccaacccg
gaaaacccaactccgggaaccctccgccacgccgtgatccaattcgaaccactctggatc
atcttctccgccgacatgacaatcaaactcaaatatgaacttatcatcaacaacttcaaa
acgatcgacggccgtggcgccaacgtccacatcaccggcggtggttgtatcactatccaa
tacgtgtccaacatcatcatccacaacatccacgtgcatcactgtgtaccctctggcaat
gccaacataaggtcaaccccgacccacgtcgggcaccgagggctatcagacggggacggg
atctcaatattcagctcaagaaagatttggatagaccattgctcgctttcatactgcacc
gacgggctaatagacgcaataatgggatcgacagggataacaatatcgaacagctatttt
tcgcaccacgacgaggtgatgctgctgggacatgacgaccggtacgtgcaggactcgggt
atgcaagtaaccatagcattcaaccacttcggtgaggctctggtgcagcgcatgcccagg
tgcagacatggctacattcatgtggtcaacaatgacttcacggcttgggaaatgtacgcc
attggcggcagtgctcgccccactattaacagccagggtaaccgttatgtggctcctgtc
aaccccaatgccaaagaggtgacgagacgtttagatgcggcggagacggaatggacggcg
tggaattggcggacggacggcgatattttggtgaacggcgcgttttttgtgccgtccggt
gccggacttagcacccagtacggtaaagcctccagtactgagcctaagtcggtggctctt
attaatcagctcactatgaacgctggcgttttgggtgccccaaggtatagtaatggtgaa
gggattgtatatccaggatttagcggcagcactggcggcggtaatggcggatatggcggc
ggcactgtcattaataatagcccgatgtatggaaatagcggtggtggagaggatgacttt
tacggaatgatatttaaaggcggcggtaacagagtatcgccgccgtggtcgccgccgatg
atcttatgtgtgcaaattttagtagttttgtatgtagtaacaaataatagtggtttattg
acgttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system