KEGG   Cucurbita moschata (crookneck pumpkin): 111451192
Entry
111451192         CDS       T05248                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmos04131]
    111451192
   04121 Ubiquitin system [BR:cmos04121]
    111451192
Enzymes [BR:cmos01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111451192
Membrane trafficking [BR:cmos04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    111451192
Ubiquitin system [BR:cmos04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111451192
SSDB
Motif
Pfam: DUF1117 zinc_ribbon_9 zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-RING_16 zf-RING_5 zf-RING-like CxC4 Rad50_zn_hook zf-HC5HC2H_2 Prok-RING_4 zf-C3H2C3 Vps39_2
Other DBs
NCBI-GeneID: 111451192
NCBI-ProteinID: XP_022947282
UniProt: A0A6J1G610
Position
Unknown
AA seq 378 aa
MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG
SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS
WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY
LRRPNRTWLENHTENGRW
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggcttccggtacggcgtcgtattggtgttaccggtgcaatcgattcgttcgtgcttgg
gttcaagacaccatatcttgtccttactgtgacggtggatttgttgaagcaatcgaaacc
gcgtcttctctcccggcggcgaatctccaccgtcgattctcgccgtctgcgattcacact
ttggatcaagatccgtttcagtctcctcgcttgagcacccggcgaagtcgccgtagactt
ggggatcggtcgacttttaaccctgttgttgttcttcgtggttctgccgacggtggcgat
gagggcggcggtggtggggagaataatagcttcgatatttactatgacgatggtgctggg
tctggtcttcggccggttccggcgacgatgtcggagtttctgatggggactggatttgat
cggttgttggagcagttggctcaactggagatcaacgggtttggcagatctgaaaatccg
ccggcgtcgaaagcagcggtggaatcaatgccgacgattgagattttggaaagtcacgtg
gattcagattcgcactgtgcggtttgtaaagaggcgtttgaaataggaaccgaagcccga
gaaatgccctgtaagcacatatatcactccgattgcataatcccttggctttcgatgaga
aattcctgtccagtctgccgacacgaactgccatcggaacgcgtatctccagccggcggg
gtttcagatcgcgtggtcgacgaagagaccgtagggttaacaatctggagactccctggc
gggggattcgccgttggccgattcaccggcggtagactgaccggcgagagagatccacca
gcggtctacaccgaaatggacggtggattcaatgccaacggagctccgagaagggtctcg
tgggcttcgagaagaagcaggggaagggaaaaccgaggaatcggacgaacattccgtaac
atcttttcttttttcggaagattaaggtcttcgaattcatcttcttctttggcttcgaat
gaaactgaatctgttagtagaagccatagccgttcgagctcttcagtcttcagcagatac
ttgcgaaggccaaacagaacttggctggagaatcatactgaaaatggccgatggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (32)   

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