KEGG   Cucurbita moschata (crookneck pumpkin): 111452317
Entry
111452317         CDS       T05248                                 
Name
(RefSeq) DNA ligase 6-like isoform X1
  KO
K15340  DNA cross-link repair 1A protein
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111452317
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    111452317
SSDB
Motif
Pfam: DRMBL RMMBL PHP Lactamase_B_2
Other DBs
NCBI-GeneID: 111452317
NCBI-ProteinID: XP_022948738
UniProt: A0A6J1GA61
Position
Unknown
AA seq 615 aa
MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV
LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW
PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM
SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE
CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI
FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTKSKASPGKRKRNLQGKSKKNSSLQS
DGSKQSTITKFFGKA
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggcttccgaatcttccaccgctaaacccttagcaatcgactcatccctctccttcgtc
actgccattgaatccttttcacggcaattgaatctctctcttcctcctctgaagctccca
ttccggccgcctccattaccggccgatttcccccaatccaaactcattcccaaatcccgt
ttcgtcgtcgacgcattttctcacgctggtgagttctctgtttcctatttcctttcccat
tttcactccgatcactatgccggtctctcccctacttggtgcaagggtatcatcttctgc
tctgatgttaccgcccgccttttgcttgaagttctcaaagtcccgttgccgtttgttcaa
tcattgccgcttcgggagcctgtagtaatcgatggatgtgaggtaatacttattgatgcc
aaccattgtcctggtgcggtgcagttcttgtttaagattcctagtgcggatgaaaagttt
gagagatatattcatactggggattttcggttttgtgattctatgataatcgaccctgtt
ttgaaaacgtttattggttcggatgcagttttcttggacactacttattgtaatccgaag
tttatttttccttctcaggatgagtctattgaatatattgtcaacatgatacaaaaaatt
ggaggtgaaagtaagggttctatggggagtgttcttttccttatagcaacttatgtaatt
ggtaaggaaaaaattttgcttcaaattgcaagtagatgtaatcgtaagataatggtggat
gctaggaaaatgacagttttaaggattttggggtatggtggtgagaatggggtgtttact
gagcatgaaagtgaaagtgatgttcatgttgttggatggaatgttttgggtgagagctgg
ccttattttaggcctaattttgaaagaatgaatgatataatggtggaaaaggggtattct
aaggttgttggttttgttccaacagggtggacttatgagatgaaacacaagaacttctca
gtgaggtctaaggattcgcttgagatacatttggtgccatatagcgaacattcaaactac
aatgaaattagggaatttgttaagtttttgaagcctagaagaattgttcccactgtaggt
ttggatgttgataaacttgatagcaagcatgctgataagattaggaagcattttgctggt
ttagttgatgaaatggccaacagaaaagaattcttaaaagggtttcatcgtggagaaatg
agtgatgatattgatgaaactgccacaatgactgtaaatgaggacttggaagagatggaa
actgtatcagaaacatgtggtagtagtatggcgttgtcttctctgcaagaagttggttct
accgatcgatccgtgttgaatgacgaggagcagaagaagattatccaggaacttcgtgag
tgcttgcctgcatgggtgactcaggatcagatattagagctgattagcaggtctgggaga
aatgtggttgatgcagtttctaatttctatgaacaagaaactgaattttatgaacatatt
gctagtctcccggacaaccttcccaagttccaaggcaaagttgtagataggccatttatt
tttcctgcaagagatgatattaaaaagaatgttttcttgggaaattttgacatttcttca
ggccaagcttcgaagtcgtccagtccaaggggcaagacgacgaccaagagcaaagcttct
cctggaaaaaggaagagaaatcttcagggtaagtcgaaaaagaattcaagtctgcaatct
gatgggtcaaagcaatctacaatcacaaagttcttcgggaaagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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