KEGG   Cucurbita moschata (crookneck pumpkin): 111454003
Entry
111454003         CDS       T05248                                 
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    111454003
Enzymes [BR:cmos01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     111454003
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg
Other DBs
NCBI-GeneID: 111454003
NCBI-ProteinID: XP_022951032
UniProt: A0A6J1GGK0
Position
Unknown
AA seq 652 aa
MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYIMNE
KLASYKYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLL
IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL
PDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW
LITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY
LNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE
DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI
GDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLY
LNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK
FELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYW
LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgccgccactgggtgtgcaactctccattgcagaacatcaggtgacaatggacaatggc
atagtccaagtcacgttgtcaaacccagatggcatagtgaccggaattcgatacaatgga
gttgacaacttgctcgaagttctcaatgacgaatctaacagagggtatattatgaacgaa
aaacttgcttcatataagtactgggacctcgtgtggaacccatcagcctctgcaactgga
tcgtttgatgtgataaaggctacagattttgaggttatagtggaaaatgaagaccaagtg
gagctctcctttacgagaaaatgggatctgtctctcgagggaaagcttgtgccgttattg
attgataaaaggtttataatgcttcggggttcatctggattctattcgtatgctatttac
caacacttgaaagaatggcctggtttcaaccttggtgaaaccagactcgccttcaaactc
agaaaagacaagttccattatatggccatggcagacaacagacagagatccatgccactt
ccagatgaccggtcaccaccgagaggccgagctctggcctatccagaggctgtcctgctc
gtcgaccccatcgaatccgagcttaagggagaggtggatgacaagtatcaatattcatgc
gataacaaagatagcggcgtccatggatggatatccaccgacccgccaatcgggttctgg
ctaatcacccccagcaatgagtgccgttccggtggacccgttaaacagaacctgacttcg
cacgtcggcccgaccactcttgctgtttttattagcgcccattacacgggagaggatctg
gtgccgaaaatcggagccggcgaggcatggaagaaagtcttcggtcctgtgtttatctat
ctcaactccacttacgattctagcgacgcccttcagctctgggaagatggcaaatcacag
gcatcgattgaagtccaaagttggccatacagcttccctgcttcggaggattttccaaag
tcaaaccaacggggtaatatcagtggcagactattagtcaaagatagctacgttagtgaa
gactacattccagcaaacggtgcgtttgttggcttagctccaccaggagacgtaggttca
tggcaaagagagagcaagggttaccaattttggagcagagcagatgaagatggatacttt
ttcatcgaccacataaggcctggcgactacaatttatatgcatgggtccccggtttcatt
ggagattatcgttacgattctatcatcgacatattagaaggtagtcagatagacgtggat
gagataatatacgagcctccaagagcaggggcgacactgtgggaaattggagtcccggat
cgctcagcagaagagttctatgttccagatccaaatcccaactacgtcaataagctctat
cttaaccattccgataagtttcgccagtatggtctgtgggaaaggtacagcgaattgtat
cccgatgcagacttggtgtataccgtcggcgtcagtgattataccaaggactggttcttc
gctcaggttaccaggaagacagaaaacggaacattcaagggaacaacatggcaggtgaag
ttcgagctggacaacgtggacagccaagcaacttacaagcttcgggtcgcactggcctcc
gcttctatcgcggaattgcaggttggagtaaatgacccgaaagcaaagccggtgttctca
agtgggctaatcggaagggacaattcgatcgctagacacggcattcacggcctgtactgg
ctctacaacgtgaatattccgggaaaccggctggtctccggcgacaacaccatcttcttc
acgcagccgagaagcaccagccctttccaagccattatgtacgactatattcgtctggaa
gctcctccgcctccgtcctccgcccatggtttgttataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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