KEGG   Cucurbita moschata (crookneck pumpkin): 111455205
Entry
111455205         CDS       T05248                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmos04131]
    111455205
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmos04147]
    111455205
Membrane trafficking [BR:cmos04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    111455205
Exosome [BR:cmos04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111455205
  Exosomal proteins of bladder cancer cells
   111455205
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40 zinc_ribbon_9
Other DBs
NCBI-GeneID: 111455205
NCBI-ProteinID: XP_022952545
UniProt: A0A6J1GKI9
Position
Unknown
AA seq 1217 aa
MLTKFETKSNRVKGLSFHCKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKDDLVVSASLDQTVRVWDISALTKKSVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSSVMFHAKQDLIISNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLGRERPAFVISGDTLLYTKDRFLRFYEFSTQRDTQVIPIRRPG
SINSNQSPRTIVYSPTENAVLICSDLDGGSYELYTIAHENIGRGDSLQDAKKGVGGSAVF
VSRNRFAVLDKSNMQVLIKNMKNEVVKKSVLPVAADAIFYAGTGNLLCRAEDRVVLFDLQ
QRVVLGDLQTPFIKYVVWSNDMESVALLSKHVIIITSKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYLTKVSGNTIFCLDRDGKNKTIVIDATEYI
FKLSLLKKKFDHVMSMIKNSQLCGQAMISYLQQKGFPEVALHFVKDERTRFNLALESGSI
QIAVASATALDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNTNKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENVGHLPLAYVTASVHGLHDVAERLAAEL
GDDVPALPEGKVPSLLMPPSPVMCGGDWPLLRVMKGIFEGGLDTVGRGVADEVEEAADGN
WGEELEMVEVDGLPNGDVTAILEDGEVAEENEEDGGWDLEDLELPPEPETPKASAGARSF
FVAPTPGMPVSQIWVQRSSLAAEHAAAGNFETAMRLLNRQLGIKNFAPLKSMFLNLHGGS
HSHLRAFSSAPVITLAVERGWSESASPNVRGPPALIFNFSQLEENLKAGYRATTTGKFSE
ALKLFLSIIHTIPLIIVESKREVDEVKELVIIVKEYILGLQMELKRREVKDNPIRQQELA
AYFTHCNLQLPHLRLALQNAMTVCFKAKNLATAGNFARRLLETNPVVENQAKAARQVLQA
AERNMTDASRLNYDFRNPFVICGATHVPIYRGQKDISCPYCNTRFVPSQEGQLCTVCDLA
SVGADASGLLCSPSQIR
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgctgacgaagtttgagacgaagagtaatagagtgaaggggctgagtttccactgtaag
aggccatggatcctggcgagtcttcacagtggtgtgattcagctatgggactaccggatg
ggtactcttattgatagatttgacgaacatgatgggcctgttcgtggtgttcattttcat
aaatctcagccgttgtttgtttccggaggtgatgattacaaaattaaagtatggaactat
aagacgcaccgatgcctgtttactcttcttgggcaccttgattatattcgcaccgtgcaa
tttcaccatgagtctccgtggatcgtgagtgccagtgatgaccaaactattcgaatttgg
aactggcagtctcgtacttgcatttctgtgttgactggccacaatcattatgttatgtgt
gcttcatttcaccctaaggatgaccttgtcgtgtctgcctccctagatcagactgttcgt
gtttgggacattagtgccttgacaaagaagtcagtgtcccctgcagatgacattttgcgg
ttgagtcagatgaatacagatctttttggaggtgttgatgctgtggttaaatatgtattg
gaaggtcacgaccgtggagtcaactgggcttctttccatccaactttgcccttgattgtc
tcaggagccgacgaccggcaagtcaagttgtggcgaatgaatgacacaaaagcttgggaa
gtggacacattgaggggtcacatgaataatgtttcaagtgttatgttccatgctaaacag
gatttgatcatatccaattcagaggacaagagcattcgtgtatgggatgttacaaagcgt
actggtgtccagacatttcgtcgtgaacatgaccggttctggattcttgctgctcatcca
gagatgaacctattggctgctggtcatgacagtggcatgattgtctttaagttggggaga
gaacgaccagcttttgttattagtggagatactctattgtataccaaggatcggtttttg
cggttttatgagttttcaactcaaagggatactcaagtaattccaattcgacgtcctgga
tccattaactcgaatcagagcccaaggacaatagtgtatagccctacagaaaatgctgtt
cttatttgctcagatctggatggtggatcatatgaattatataccatagctcatgaaaac
attggtcgaggtgatagtctacaagatgccaagaagggcgttggcggatcagcagtcttt
gtgtctcgtaataggtttgctgtgttagataaaagtaacatgcaagtcttgatcaagaat
atgaagaatgaagtcgttaaaaagagtgtcctccctgttgctgcagacgcaatattctat
gcaggaacaggtaacttattatgcagagccgaggatagagtggttttattcgatctccag
caaagagttgttcttggtgacctgcagaccccatttataaagtatgttgtctggtccaat
gatatggagagtgttgctttgcttagcaaacatgtcattatcattaccagcaagaagctt
gtgcatcagtgcactcttcatgagacaatccgtgtgaaaagtggtgcatgggatgataat
ggtgttttcatttatacgacgttaaatcatatcaaatattgtctgcctaatggagatagt
gggataatcagaactcttgatgttccaatatacctcacaaaggtgtctggcaatactatc
ttctgcttagatcgggatggaaagaacaaaaccatagttatcgatgctacggagtatatc
ttcaagctgtcccttctgaaaaaaaaattcgaccatgtaatgagcatgattaaaaactct
cagctttgtggacaagcaatgattagttatttgcaacaaaagggtttccctgaagttgct
cttcattttgtgaaagatgaaagaactcggtttaatttggctcttgagagtgggagcatt
cagattgcagttgcttcagcaactgctcttgatgagaaagaccactggtacagattgggt
gttgaggctcttcgtcaaggcaacgcaggaattgtcgaatatgcctatcaaaggacaaaa
aacttcgagaggttgtcttttctttatcttataaccggtaacaccaacaagttgtctaag
atgcttaagattgctgaagttaaaaatgacgtgatgggccaatttcacaatgccttatat
cttggtgatgtccgggagcgtgttaagatattggagaatgttggtcacttgccccttgct
tatgtcacagcttcagttcacggactgcacgatgttgctgaacgacttgcagctgaatta
ggagacgatgtcccagctttgccggagggaaaagtaccatctctcctgatgcccccttct
cccgttatgtgtggtggtgattggcctcttctgagagtcatgaaaggcatatttgaaggt
ggattagatactgttggcagaggtgttgcagatgaagtagaggaggctgccgatggcaat
tggggtgaggagctggaaatggttgaagttgatggtttaccaaatggggacgttacagca
attctagaagatggtgaagtggctgaagaaaatgaagaagatggtggctgggaccttgaa
gacttggagcttcctcccgaaccagaaactcctaaagcttctgccggtgcacgttcattt
tttgtagctccaactcctggcatgcctgtcagccaaatttgggtccagaggtcatctctt
gctgccgagcacgctgctgctggtaatttcgaaactgccatgcggttgctcaacagacaa
cttggaataaagaattttgctcccttgaaatcaatgtttctcaatcttcatggtggcagc
cactcccatcttcgtgcattttcgtctgctccagtgataaccctggcagtcgaacgggga
tggagcgagtctgcaagcccaaatgtaagaggtccccctgcactcattttcaatttctct
cagttggaagagaatctgaaagctggttacagggccacaaccactgggaaattctctgaa
gctctgaagctttttcttagcattattcatacaataccattgattattgtggagtcaaag
agagaagttgacgaggtaaaggagttggttattatagttaaagagtatatattaggtttg
caaatggagctcaagaggagagaagttaaggacaatccgattcgccaacaggaactcgcg
gcctattttactcactgcaatctgcagctaccacatttaagacttgccttgcagaatgca
atgactgtctgctttaaggctaagaaccttgctacagcaggtaactttgccaggcgcctg
ctcgaaaccaatcccgttgtcgagaaccaagcaaaggcagccaggcaagtgctgcaggct
gctgagaggaacatgacagatgcttccaggcttaattatgattttagaaacccctttgtg
atctgtggggctacacatgtgccaatttatcgaggacagaaagatatctcgtgcccgtac
tgcaatacccggttcgtgcctagccaggaagggcagctttgtactgtttgtgatcttgct
tctgtgggggcagatgcatctggattactctgctctccttcccagattcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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