KEGG   Cucurbita moschata (crookneck pumpkin): 111456639
Entry
111456639         CDS       T05248                                 
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
  KO
K15446  tRNA:m4X modification enzyme [EC:2.1.1.225]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmos03016]
    111456639
Enzymes [BR:cmos01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.225  tRNA:m4X modification enzyme
     111456639
Transfer RNA biogenesis [BR:cmos03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    111456639
SSDB
Motif
Pfam: TRM13 zf-TRM13_CCCH zf-U11-48K Methyltransf_32 Methyltransf_25 Methyltransf_12 Methyltransf_31 Methyltransf_11
Other DBs
NCBI-GeneID: 111456639
NCBI-ProteinID: XP_022954384
UniProt: A0A6J1GSU8
Position
Unknown
AA seq 457 aa
MASRCQFWLPKKNRFCANSPINDSKFCGNHSSRADTQWVPCPVDPSHSVLRENLEWHVKR
CPLLKQTQSLAVQPFYQKGINAGEEDSISSDELASGLSDSISSEMKRNIVYGMSGAEFHR
LLAKIRALHGLICKDIQDSYRIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNMEEFGV
LRNYDGGEQCEGNRSCGNEANVAPAVIEFGAGRGYLTQMLADCYGIKRVLLVERKSYKLK
ADRSLRQKESLVLERLRIDIEDLNLNAVESLRHDPYLAIGKHLCGPATDLALRCCLTKQS
NHVNTEQCGDRPKLRGLAIATCCHHLCQWKHYTNKKYLLELGIAKEEFLAITWFTSWAVD
ANHSEDISDVSDSKTFLQSSENEGDGMNGSTVEDIARHMNPVERAVLGFMCKEIIDMGRL
MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAA
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggcttcccggtgtcagttttggcttccaaagaagaacagattctgtgcgaattctccc
attaacgattccaagttttgtggtaatcatagctcgagagcggatactcagtgggttcca
tgtcctgtagacccgtctcactctgtgcttcgagaaaatcttgaatggcatgtaaagagg
tgtccgttattgaaacaaactcaatccttggctgtccaaccgttctaccaaaagggcatc
aatgctggggaggaggattcgatatcgtccgatgaactggcttcgggtttgtcagatagc
atttcctctgaaatgaagaggaatatcgtttatggaatgtctggagctgaatttcatcgg
cttcttgcgaagattagagctcttcatggtcttatatgcaaggatattcaagactcttat
aggataaaggaagcttgcaatatgtggattaaaggagaaatagataggaaaattccattt
caagagaaacatgttctgcagcaggcgtcgattcttgggaacatggaggaatttggagtg
ctgaggaattatgatggaggggaacaatgcgagggtaacagatcgtgtggcaatgaggct
aatgttgcccctgcggtaattgagttcggggcaggaagaggctacttaactcaaatgctt
gcggattgctatggtataaaaagggtgcttctggttgagcggaaatcatacaaactgaag
gctgatcgatcactgcgacagaaggagagcttggttttagagcgtttgcgaatcgacatt
gaggatctaaacctgaatgctgttgaatctttgaggcatgatccttacttggctattggc
aaacatctctgtgggcctgcaacagatttggctctcagatgttgtcttaccaaacaatcc
aatcatgtcaatactgaacagtgcggagataggccaaaattgagaggtttggctatagcg
acatgttgtcatcacctttgtcaatggaagcattacacaaataagaaatacttattagaa
ctcggaatcgcaaaagaagaatttcttgctattacatggttcactagttgggcagtggat
gctaatcacagtgaagatatttcagatgtttcagactcgaaaacgtttcttcaatctagt
gaaaacgaaggcgatggaatgaacggaagcacggtagaagacattgctagacatatgaat
ccagtggaaagagcagtcctgggatttatgtgcaaggagattattgatatgggaagacta
atgtggctcaaggaatgtggcttggaaacacagcttgtcaagtatgtcccatctagcatc
tcccctgaaaaccatttacttattgctaaatgcagaaatatttgtgctgcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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