KEGG   Cucurbita moschata (crookneck pumpkin): 111462905
Entry
111462905         CDS       T05248                                 
Name
(RefSeq) RNA polymerase sigma factor sigC-like
  KO
K03093  RNA polymerase sigma-I factor
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmos03021]
    111462905
Transcription machinery [BR:cmos03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     111462905
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 HTH_31
Other DBs
NCBI-GeneID: 111462905
NCBI-ProteinID: XP_022962483
UniProt: A0A6J1HEX7
Position
Unknown
AA seq 558 aa
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS
LPTGRASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS
SFRDLSDLPIEVGGDHNVNQKTDDQNDNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT
RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETSEKESGRTASMSC
WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA
TTKLKNEETVRNLSHYLD
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgggaacgagtttccgcccaaatctcaagtgggctttccaaattcagactcattcccgc
cgggcctccccttccaagctctctccctatgcctctaaaggcagggaagcttcctttaat
tcgggaaggctttcgttcttctccagtacttgtgaggaaggagaggctatctctagagaa
gccttgaaaacatacacttgcttgtctgaagctccacaaaccttagccgatggtctgtta
gatttggaagagaaagagatagagataaacagtggggcaaagtcactcggtcatttgcgt
tacggttcgaaaaattctgggccatccaaggtagaggacaatttttgttcctgtacgagc
ttgcctactggcagggcgtcgccttttggcatgttaatggaaaaccttgatgttttggag
gaaacttttactgaatcaggcatgctaagcttggaaagagatatcgtattgcaactaaca
aaacttggagctttggagttttttaatgcctgtctatctaggacgcttaaagcatcatca
agttttcgtgatttgtcggacttacctattgaggttggtggagatcataatgtaaaccag
aaaactgatgaccagaacgacaatatcatagtttactctggaaaaagagcaggaagaaga
tcagtaaaaaggagagcaatggataatgctgataaagttgcttcacggccgctagctaca
agagctgctaaagaaaaattccgtagttcgaggaaaaaagcatctaattcgaaaaaaaga
agatcgattgttgcgcgaaatgaagctgaaatgtccaccggggttaaggtagttgcaaat
ttagaaagaattagagaaacttcagaaaaggaatccggaagaacagcaagcatgagttgc
tgggccgacgcagccagcattgatataaaggacctgcagaaacagttacaatttggctgg
ttctgccaggatgagctcttaaggagcacgaattcattggttatattccttgcaaagaaa
tatcgatgctccgggttaccaatggaggacttggttcaggcaggagccattggcgtgctg
caaggtgtggaaaggtttgacccgaaaaggggttttagattctcaacctatattcaatac
tggataaggaaatcaatgtcgagagtcgtggcacgaagttcaaggggaattcaaattcca
tggtcattaaccaaggcaataaatcaaatacagaaggctcgaaaagcgttgaacaacagt
ggtaggagatattcggatgacgatatagccaaggctactggtcttcctttggccaaggtt
agagttgctagcaactgtttaaaagttgtgggttcagttgatcagaagataggtgatgga
ctaaatatgaaatatatggaattgacagcagatacatcaatagagagcccagaagacact
gtgaagcggaggctaatgaagaaagacatctttaatcttcttgaagtgttggaatcaagg
gagagacaggtcctggtgctgcgatacggactcatggattcccaaccaaagtcactcgag
gaaatcggaaaacttctgtgcgtaagtaaggaatgggttcgaaaaatcgaaaggaaagcc
acaacaaagcttaaaaatgaagagacggtgagaaacttgagccattatttggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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