KEGG   Cucurbita moschata (crookneck pumpkin): 111464468
Entry
111464468         CDS       T05248                                 
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111464468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111464468
   03110 Chaperones and folding catalysts [BR:cmos03110]
    111464468
   03029 Mitochondrial biogenesis [BR:cmos03029]
    111464468
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmos04147]
    111464468
Enzymes [BR:cmos01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     111464468
Messenger RNA biogenesis [BR:cmos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     111464468
Chaperones and folding catalysts [BR:cmos03110]
 Heat shock proteins
  HSP60 / Chaperonin
   111464468
Mitochondrial biogenesis [BR:cmos03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    111464468
Exosome [BR:cmos04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111464468
  Exosomal proteins of other body fluids (saliva and urine)
   111464468
  Exosomal proteins of breast cancer cells
   111464468
  Exosomal proteins of colorectal cancer cells
   111464468
  Exosomal proteins of bladder cancer cells
   111464468
SSDB
Motif
Pfam: Cpn60_TCP1 ChlI
Other DBs
NCBI-GeneID: 111464468
NCBI-ProteinID: XP_022964446
UniProt: A0A6J1HIX7
Position
Unknown
AA seq 575 aa
MHRFASGLASKARLARKGANQIASRSSWSRNYAAKDVKFGVEARGLMLKGVEDLADAVKV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATILTRAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLFNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLILIHEKKISSINSVVKVLELALKRQRPLLIVSEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKAGLHDLAVLTGGQLITEELGMNLEKVDLDMLGSCKKITISKDD
TVILDGAGDKKSIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVELPKDEKEVPAMGGGMGGMDY
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgcaccgcttcgcttcaggcctcgcttccaaagctcgccttgctaggaagggtgccaat
cagattgctagtaggtcgagctggagcagaaactatgccgctaaagacgttaaatttggg
gtggaggctcgaggacttatgcttaagggtgttgaggatcttgctgatgccgttaaagtc
acaatgggtcctaaggggcgcaatgtggtgattgaacagagttatggggctcccaaagtt
acaaaagatggtgtgactgttgcgaagagtatcgagtttaaagataaggttaaaaatgtt
ggtgccagtcttgtgaagcaggttgctaatgcaacaaatgatgtagctggtgatgggacc
acctgtgctactattcttacaagagcaatatttacggagggctgcaagtccgttgctgct
ggaatgaatgccatggatctaagacgtggtatctccatggcagtcgattctgttgtaaca
aacttgaagagcagagcacgaatgataagcacatcagaagagatagcccaggtcggaaca
atatctgccaacggagaaagagaaattggtgagttgattgccaaggccatggagaaagtt
ggcaaggagggcgtgatcaccatctcggatgggaagacattgtttaatgagttggaagtt
gttgaagggatgaagttagataggggatacatttctccttacttcattactaaccaaaag
aaccagaaatgtgaattggatgatcctcttattctaatccatgaaaagaaaatctcaagc
attaattctgtggtgaaagttttagagttggctctgaagaggcaaaggccccttcttatc
gtttctgaagatgtcgaaagtgatgcactagccactcttatcttgaataagctccgtgct
ggaattaaggtctgtgccattaaagcaccaggttttggtgaaaataggaaggctggactg
cacgaccttgcagttctcacgggtggtcagctcattactgaagagcttggaatgaatctt
gaaaaagttgatctggatatgcttggctcttgcaagaagatcacaatttcaaaggacgat
acagtaattctagatggcgctggtgacaagaagtctatcgaggaaagatgtgaacagata
aggtcagctattgaactgagcacttctgattatgacaaggagaagttgcaggaaagatta
gcgaagctctctggtggtgtagctgtattgaagattggaggagcaagtgaggcagaagta
ggtgagaagaaggatagagtcactgatgccttgaatgccacaaaagcagctgttgaagaa
ggaattgtaccaggtggtggtgttgctcttttgtatgcatcgaaagaactagataaactt
tcaactgctaacttcgatcagaaaattggtgtccaaattattcagaatgctctaaagaca
cccgtacacacaatcgcatcgaatgcgggagttgagggggctgtcgtggttgggaagctg
ttggagcaggacaaccctgatcttggttacgatgctgcaaaaggtgaatatgtggatatg
atcaaagctggcatcattgatcctcttaaagtaattagaactgcactagttgatgccgct
agcgtttcctctttgatgacaactacggaagccatcgtagtcgaactccccaaggatgaa
aaggaagttccagcaatgggtggcggcatgggaggaatggattactaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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