KEGG   Cyclobacterium marinum: Cycma_4172
Entry
Cycma_4172        CDS       T01592                                 
Name
(GenBank) tRNA-specific 2-thiouridylase mnmA
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
cmr  Cyclobacterium marinum
Pathway
cmr04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:cmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    Cycma_4172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmr03016]
    Cycma_4172
Enzymes [BR:cmr01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     Cycma_4172
Transfer RNA biogenesis [BR:cmr03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    Cycma_4172
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ThiI QueC Asn_synthase Arginosuc_synth ATP_bind_3
Other DBs
NCBI-ProteinID: AEL27876
UniProt: G0J896
Position
complement(5063725..5064939)
AA seq 404 aa
MSQRKKRVVVGLSGGVDSSVTAYLLKEQGYEVIGMFMKNWHDESVTISNECPWVEDSTDA
MLVAQKLGIPFQAIDLSEDYKSRIVAYMFSEYKAGRTPNPDILCNREIKFDIFLKAAMKL
KADFVATGHYCQKEEISVNGQPMYKLIAGADNNKDQSYFLCQLDQEQLSKALFPIGHLQK
AEVREIAKKQELITAEKKDSQGLCFIGKVKLPDFLQQQLKPNKGDILTVPAESPIYATMG
IPAGVAFEDLDTNQLNETCYPLQYEASMGEKVAKHNGAHYFTIGQRKGLNVGGTGKPLFV
IATNTKDNIIYTGLGEDHPGLLRHGLFVKKEDIHWIRPDKTLNVGDSASYVARIRYRQPL
SKATLLMKENGLYVLFDRPQRGIASGQFVAWYEGEETIGSGVIY
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgtctcagcgtaaaaaaagagtagtagtaggcctttcaggaggtgtggatagttcggtt
accgcttatttgctaaaagagcagggctatgaggtaataggtatgtttatgaagaattgg
catgatgaatcagtaaccatttctaatgaatgtccctgggtggaagacagtactgatgcc
atgttagtggcccaaaagttaggcattccttttcaagccatagaccttagtgaagattac
aaatccagaattgtagcttatatgttctctgaatacaaggcaggaagaacaccaaatcct
gatattctatgtaatagagaaataaaatttgacatttttttaaaggcagccatgaaactt
aaagcggattttgttgccaccggacactattgtcaaaaagaagaaataagtgtcaacgga
caacctatgtacaaattgatagcaggggcagataataataaagatcaaagttatttcctt
tgtcaattggatcaagaacaattgagcaaggctttgtttcccattggccacctgcaaaaa
gcagaagtaagggagatcgccaaaaaacaagaattaataactgccgagaaaaaagacagc
caaggattatgcttcattggtaaggtgaagctaccggactttttacagcaacagctcaaa
cccaacaagggggatattctcactgtacctgctgaatccccaatttatgctactatggga
attccggcaggtgtggcctttgaagatttggacacgaaccagttgaatgaaacctgctat
ccattacagtacgaggcaagcatgggtgaaaaagtagccaagcacaatggtgcacactat
tttaccatcgggcagcgaaaaggcctcaacgtggggggtacaggtaaaccattatttgta
attgcaacaaacaccaaagataatattatttacacaggtttgggagaagatcatcccgga
cttttaagacatggtctttttgtcaaaaaggaagacatccactggatcagacctgataaa
actttaaatgtgggggattcagcttcctatgttgcaagaattcggtacaggcaaccgcta
tctaaggccaccctactaatgaaggaaaatggtttatatgttttatttgatcgtccacaa
aggggaatagcctccggacagtttgtggcgtggtatgagggcgaagaaacgattggatca
ggagtaatctattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (48)   

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