KEGG   Clavibacter sepedonicus: CMS1210
Entry
CMS1210           CDS       T00678                                 
Name
(GenBank) conserved hypothetical protein
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
cms  Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:cms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cms03016]
    CMS1210
Enzymes [BR:cms01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     CMS1210
Transfer RNA biogenesis [BR:cms03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    CMS1210
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM B12-binding
Other DBs
NCBI-ProteinID: CAQ01325
UniProt: B0RGZ1
Position
1264274..1265866
AA seq 530 aa
MSTVAEHVRAAPSSVDRPRTYEVRTYGCQMNVHDSERLTGSLEAAGYVSAEGAEADIVVI
NTCAVRENADNKLYGNLGHLAGVKRRHEGMQIAVGGCLAQKDRATVLEKAPWVDVVFGTH
NMGALPTLLERARHNGEAQLEILESLETFPSTLPTKRDEIASGWVSISVGCNNTCTFCIV
PALRGKEKDRRPGDILAEIQALVDDGAVEVTLLGQNVNSYGVEFGDRQAFGKLLRAAGAI
EGLERIRFTSPHPAAFTDDVIDAMAETPAVMPQLHMPLQSGSDRILKAMRRSYRSERFLG
ILDRVRTRVPDAAITTDIIVGFPGETEEDFQETLRVVEAARFSSAFTFQYSIRPGTPAAT
MEEQVPADVVKERYGRLTALQERISHEENQRVVGRTVEVLVSAHEGRKDGDTRRVTGRAQ
DGRLVHLDVPEGSAEPRPGDAVDVEVTRAAPFHLIADSVDGAPLRIRRTRAGDAWERAQA
DSCGVPTPATGASAGAAPRVSLGLPTLRVPTTASTSAPVGDGSAHPRHRA
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgagcaccgtcgccgagcacgtccgcgccgccccgtcctccgtcgaccggccccggacg
tacgaggtccgcacctacggctgccagatgaacgtccacgactcggagcggctcaccggc
tcgctcgaggccgccggctatgtgtcggccgagggcgccgaggccgacatcgtcgtcatc
aacacgtgcgccgtccgcgagaacgcggacaacaagctctacgggaacctcggtcacctc
gccggtgtcaagcgccggcacgagggcatgcagatcgcggtgggcggctgcctcgcgcag
aaggaccgggcgaccgtcctcgagaaggctccgtgggtggatgtcgtcttcggcacccac
aacatgggcgccctgccgaccctgctcgagcgcgcacgacataacggcgaggcgcagctg
gagatcctggagagcctcgagacgttcccctccacgcttcccaccaagcgcgacgagatc
gcgagcgggtgggtgtccatctcggtggggtgcaacaacacgtgcacgttctgcatcgtg
cccgccctccgcggcaaggagaaggaccgccgaccgggcgacatcctcgccgagatccag
gcgctcgtcgacgacggcgcggtggaggtcacgctgctcggccagaacgtcaactcctac
ggcgtcgagttcggcgaccggcaggcgttcggcaagctgctgcgggccgcgggcgccatc
gaggggctggagcgcatccgcttcacgagcccccaccccgccgccttcaccgacgacgtg
atcgacgcgatggccgagacgccggcggtcatgccgcagctgcacatgccgctgcagtcc
gggtccgaccggatcctcaaggccatgcgccgctcctaccggtccgagcggttcctcggg
atcctcgaccgggtgcgtacgcgcgtcccggacgcggcgatcacgaccgacatcatcgtc
ggcttcccgggggagacggaggaggacttccaggagaccctccgcgtcgtcgaggcggcc
cgcttctcctccgcgttcacgttccagtactccatccgcccgggcacccccgcggcgacg
atggaggagcaggtgcccgccgacgtcgtgaaggagcggtacgggcgcctcaccgctctg
caggagcgcatcagccacgaggagaaccagcgcgtggtcggccgcacggtcgaggtcctc
gtgagcgcgcacgagggacgcaaggacggcgacacgcgccgcgtcaccggacgcgcccag
gacggccgcctcgtgcacctcgacgtgcccgagggcagcgccgagccgcggcccggcgac
gcggtcgacgtcgaggtcacccgtgcggcgccgttccacctcatcgcggactcggtggac
ggcgccccgctgcgcatccgccgcacccgcgcaggcgacgcatgggagcgggcacaggcc
gactcctgcggcgtgccgactccggcgacgggcgcgagcgctggcgctgcgccgcgcgtg
tcgctcggactgccgacgctccgcgtgccgacgacagcttcgacgtccgcgcccgtgggc
gacgggtccgcgcacccgcgacaccgcgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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