KEGG   Cordyceps militaris: CCM_07554
Entry
CCM_07554         CDS       T03108                                 
Name
(RefSeq) nuclear pore complex subunit Nup192, putative
  KO
K10609  cullin 4
Organism
cmt  Cordyceps militaris
Pathway
cmt03420  Nucleotide excision repair
cmt04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CCM_07554
  09124 Replication and repair
   03420 Nucleotide excision repair
    CCM_07554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmt04121]
    CCM_07554
   03400 DNA repair and recombination proteins [BR:cmt03400]
    CCM_07554
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmt04147]
    CCM_07554
Ubiquitin system [BR:cmt04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     CCM_07554
DNA repair and recombination proteins [BR:cmt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      CCM_07554
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CCM_07554
Exosome [BR:cmt04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CCM_07554
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 18169565
NCBI-ProteinID: XP_006672758
UniProt: G3JQ52
Position
Unknown
AA seq 828 aa
MHSVADQEISPSRRRPRPASSSSLASAPKRPKFGDAAMASAKARGKLPEVIDLTEKPSAF
QPHAGAKKLFIKNLRPASLDVRMEHYYAKTEEDLDGGLGAIFAGRKPAVPLERLYRGVED
ICRQGNAEKIYRMLMKRVERHLHSVVLPRIVKVGDMPEVDILRNVLAEWKIWNHQTVLIR
STFSYLDRTYLLREALPSINDMTISHFRRMLFSSQSGNRSLENHVIGGTCKLVDYDRRGT
TWMDGELLKDSIMMFYVQGVYTKHFEPVMIKTSKIYYQEFGAARSTDDLKVYIAACERLL
TREASRCMAYNLDSTTERLLLELAHRILINDYSEKLLNEGSLANLIGDKDLKSMKGLYDL
LKLSGLQKKLKQPWADYVKKTGADIVSDKEHGDEMVIRLLELRRSLDLMIRDAFGRDEDF
LWAMRESFGNFMNDRTVAGCWDTGTSKIGEMTAKHIDMLLRGGIKTLPKSLLSDSQDRAT
AERAGQASTADEDAELDRQLDNSLELFRFIQGKDAFEAFYKKDLARRLLMGRSASQDAER
SMLTKLRGECGANFTQNLEQMFKDQELAKDEMEAYKQHCQNTSDDKPSVDLNVMILSSAA
WPSYPDIRLNLPDDVATQIERFDRHYKGKHTGRVLTWKHSLAHCSVKAVFTKGSKELLVS
AFQAVVLLMFNTASSGPLTYEQLSTGTGLTGGELDRTLQSLACGKARVLSKHPKGREVKK
TDTFTFNAAFSDPKYRVKINQIQLKETKEENTATHERIAQDRRFETQAAIVRIMKSRKSM
GHAELVAEVITLTKKRGSVEPAAIKKEIESLIEKDYIEREGNAYIYMA
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgcactccgttgcggaccaggaaatctcgccctctcgccgccgtccgcgaccagcctcg
tcctcgtcgctcgcctccgccccgaagcgccccaaattcggtgacgccgccatggccagt
gccaaagcgcggggcaagctgcccgaggtgattgacctcaccgagaagccgtccgccttc
cagccccatgcgggcgccaagaagctcttcatcaaaaatcttcgccccgcgtcgctcgac
gtgcggatggaacactactacgccaagacggaggaggatctcgacggcgggctgggtgcc
atctttgcggggcgtaaacctgcagtgccgcttgagaggctttaccgcggtgttgaggat
atctgccgccaaggaaacgccgaaaagatctaccgtatgctgatgaaacgcgttgagaga
cacctgcactcggtcgtgctacctcgaatagtaaaggttggcgacatgccggaggttgat
atcctaagaaacgtcttggctgagtggaagatttggaaccatcaaacggtcctcattcgg
tccacattcagctatctcgacagaacgtacctattacgagaagcccttccctcgatcaac
gacatgactatttctcactttcgcagaatgctatttagctcacaatctggaaaccgtagc
ttagaaaaccacgttattggcggaacatgcaagttggtggactacgacagacgcggtacg
acctggatggatggcgaacttctcaaagattccatcatgatgttctacgtccaaggtgtc
tatacaaagcactttgagccagtgatgatcaagacttccaaaatctattatcaagagttt
ggagccgcacggagcaccgatgatctgaaggtgtatattgccgcttgtgagaggttgcta
acaagagaagctagtcgctgcatggcatataatctggacagcacgacggaacgactgtta
ttggagctggcacaccgaatcctcatcaacgactactctgaaaagttactaaacgaagga
agtctggcgaacctgataggcgacaaggatttgaagtcgatgaagggcctctacgacctg
ctcaaactctctggtctacagaagaaactaaagcagccctgggccgactatgtcaaaaag
acgggcgcggatattgtctcagacaaggaacacggggacgagatggtcatccgtcttctg
gagctgcgccggtccctagacctgatgattcgggatgcctttggcagggacgaagatttc
ttgtgggcgatgcgtgaatcatttggcaactttatgaatgatcgcactgtggctgggtgc
tgggacacgggtacctccaagattggcgaaatgactgccaagcatatcgacatgctgtta
cgcggcggcataaagacgttgcccaagtcgttgctatctgacagccaagaccgagccact
gccgagagagcaggtcaggcgagcacagccgacgaagatgccgagctagacaggcagttg
gacaactcgctcgaattgtttcgcttcattcagggaaaagacgctttcgaggcgttttat
aaaaaggatctggcaagacgactactcatgggccgcagtgccagccaggatgctgaacgc
agcatgctaacgaagctgcgcggagaatgtggtgccaatttcacgcaaaatctggaacaa
atgtttaaggaccaggaacttgccaaggacgagatggaggcctataagcagcactgccaa
aacacatccgacgacaaaccgtctgtggatttgaacgtcatgattctatcatcggccgct
tggccatcatatccggacatccgcctgaacctacccgacgatgtcgccacccaaatcgag
cggtttgaccgacattacaaaggcaagcataccggacgtgtgctgacctggaagcactcg
ctggcgcactgctccgtcaaggccgtcttcaccaagggatccaaagagcttctcgtgtcc
gcattccaggccgtcgtgctgctcatgttcaacacggccagcagcgggcccctgacgtac
gagcagctctccactggcaccgggctgacgggcggtgagctcgaccgcacgctacagtcg
ctggcgtgcggcaaggcacgcgtcctgagcaagcaccccaagggccgcgaggtcaagaag
acggacacgtttacgtttaatgcggccttttcggaccccaagtaccgggtcaagattaac
cagatccagctcaaggagaccaaggaggagaacacggcgacgcacgaacgcattgcccag
gaccgacgcttcgagacgcaggccgccattgtgcgcatcatgaagagccgcaagagcatg
ggccacgcggagctagttgcggaagttatcaccctgacaaagaagcgaggcagtgtggag
ccggccgccatcaagaaagaaatcgagagcttaatcgagaaggactacatcgagcgtgaa
ggaaatgcttacatatacatggcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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