KEGG   Chelonia mydas (green sea turtle): 102929447
Entry
102929447         CDS       T02989                                 
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
  KO
K05648  ATP-binding cassette, subfamily A (ABC1), member 5
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    102929447 (ABCA5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cmy02000]
    102929447 (ABCA5)
Transporters [BR:cmy02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    102929447 (ABCA5)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 AAA_16 AAA_22 nSTAND3 MMR_HSR1 AAA_23 Dynamin_N
Other DBs
NCBI-GeneID: 102929447
NCBI-ProteinID: XP_037769807
Position
14:6062518..6122174
AA seq 1646 aa
MATETAGEAGVWRQTKALLFKNYLVKCRTKKSSVQEILFPLFFLFWLILMSMMHPNRKFG
EVPNTDLGTLDRSMLLDFILGYTPVTNMTRKIMQKVSFEYFADGVITEEFFSEKELQEAS
TVNPSNFVGVVFKDSMSYQLRFFPGAVTVSSINVESRASCSSLSKGCESVTYWYSGFAAL
QACIDAAIIQLKTNHSVWEELESTKAIIMGEAADMKIDYFPRAIILIYLVIAFSPFGYYL
AIHIVAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTTLIFVMSILMAVIATASSLFPQSSS
FVIFLLFFLYGISSVFFAFMLTTLFKKSKHVGVVEFLATLAFGFVGLTIVLLDDFPKSFV
WTLSPLCQCTFLIGIAQVMHLEDYQDGAIFSNLNHGPYPLVISLILLVLDSMFYLLLAVY
LDQVIPGEFGLRRPSFFFMKPSFWSKRRRNYKELYESSVNGSLSFSEMVEPVSSEFQGKE
AIRISCVQKTFRKKGETVEALRSLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPPSDG
FASVYGHRISEIDEMLDVRKITGVCPQLDIHFDVLTVEENLSIFAHIKGISPNLLIQEVQ
KVMNDLDMQPIRDNQAKKLSGGQKRKLSIGIAVLGSPKVLLLDEPTAGMDPCSRHIVWNL
LKNRQANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSLFLKTKWGIGYRLSMHIDG
YCNIEATTALIRQHIPGASLVQQNELQLVYTLPFKDMDKFSGLFSDLDTHSHLGVITYGV
SMTTLEDVFLKLEIEAEIDQADYSIFNSQSAGEEMDTKSFDEMEQSLLILSETKSSAVSN
TALWKQQVSTIAKVHFLNLRRENKSVGIMLLLFLVFLAVQILMFLIHHYFKNSVVPIKLS
PDLYFLKPGEKYNKYKTNLLLQNSTGSNIDDLISALRSQKILTEMFNDSDYVSAAPHSAA
LNVSLSEQSSIFTAVFNSTMVHSLPVLMNIISNLFLRNLNVTENIQIWSNPFIQETDDTV
FRLEAFFQAMLLGIIVTGVPPYFAMENAENHKIKAYTQLKISGLYPSAYWSGQAVIDFPL
FFIILVLMIGSLFAFHHSVYFDTWKFLAVIFCLIGYVPSVVLFTYVLSFTFKKVQNTKEF
WSFIFSMTALISTAVTEVAFFLRYFIVTTILHYVFCAFIPIYPLIGCLITFIKVSWKHLQ
KNEKYHDPWDKLLVAVITPYLQCVVWLFLLRYLEVKNGGKSIREDPFFRTTTKIKTWKFQ
DDPHNENEDEDVKAERLWVKEKTSCQSCDEKPAILVSSLHKEYDERKDFLLGRKIKKVAT
KHVSFCVKKGEILGLLGPNGAGKSTLINMLVGDVEPTAGQVLMGDCSLGLNSEDHSAKFV
GYCPQVNPLWPDITLQEHFEIYGSVKGMSKTDVEEVVKRIASALELKNHLQKTTKKLVVG
IKRKLCFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRAAFKSKERAAILTTHYMEEA
EAVCDRVAILVSGQLRCIGSVQHLKSKFGRGYFLEIKLKETAGVQQVAFLHRQILHIFPN
ANHQESFASILAYKIPKEDVQSLSQSFSKLEEAKHAFNIEEYSFSQATLEQVFVELAKEQ
EEEDNSFGTLNSTLWWERTQEDRVIF
NT seq 4941 nt   +upstreamnt  +downstreamnt
atggccacagaaactgcaggagaggcaggagtgtggagacaaaccaaagctctcttattc
aagaactaccttgttaaatgcaggactaagaagagtagtgtgcaggaaatcctttttcca
ctattttttttattttggcttatattaatgagcatgatgcatccaaatcggaagtttggc
gaggtgcccaacactgatcttggtactttagatcgctccatgctcttggacttcattctt
ggatacacaccagtgacaaacatgacaagaaaaatcatgcagaaagtgtcttttgaatat
tttgcagatggtgtaattacagaagaatttttcagtgaaaaagaattgcaagaggctagt
actgttaacccctcaaactttgttggtgtagttttcaaagattctatgtcctaccagctt
agattctttcctggtgctgtcacagtgtcgtctatcaatgtagaatcaagagccagttgt
tccagtttatcaaagggatgtgaatctgttacatactggtactcgggatttgcagctcta
caggcttgtatcgatgcagcaataatacagctgaagactaatcattcagtttgggaagaa
ctggaatcaactaaagctattattatgggagaggctgctgatatgaaaattgattatttt
cctcgagcaattattttaatttacctagtaatagctttctcaccctttgggtactatttg
gcaattcatattgtggcagaaaaggagaagaagttgaaggaatttttaaagataatgggc
cttcatgacactgccttttggctgtcgtgggttctgctgtacacaactctgatttttgtc
atgtccattctcatggcagtcattgcaacagcctcttcactatttccccaaagtagctcc
ttcgtgatatttcttctttttttcctgtatggaatatcctcagttttctttgctttcatg
ctgacgactctatttaaaaaatcaaagcatgtgggtgtagttgaatttttggcaaccctg
gcttttggttttgtgggtctcactattgtcctgctggatgattttccgaagtcttttgta
tggaccctaagccccttgtgtcagtgtacgttcttgattgggattgcacaggtcatgcat
ctggaagattatcaagatggtgcaatattttcaaatttaaatcacggtccttatccacta
gttatttctcttattttactggttctggatagcatgttttacctacttctagctgtctat
cttgatcaggtcattccaggtgagtttggattacgacggccatcatttttctttatgaag
ccctcgttttggtcaaagcgcagaagaaattacaaggagttatatgagagtagtgttaat
ggaagcttaagtttcagtgagatggttgaacctgtatcttcagaatttcagggaaaagaa
gctatcagaatcagctgtgttcagaaaacattccgcaaaaagggtgaaactgtggaggct
ctcagaagtttatcctttgacatatatgagggtcagattacagctttacttgggcatagt
ggaacaggcaagacaacactgatgaatattctttgtggactctgcccaccttctgatggg
tttgcatctgtctatggacacagaatctctgaaattgatgaaatgctcgatgtaagaaag
ataacgggggtttgcccacaattagatatacattttgacgtattaactgtggaagagaat
ttatctatatttgctcatattaaagggatatctcccaatcttctgatacaagaggtgcag
aaagtgatgaatgatttggatatgcagcccatccgagataaccaagctaaaaaattaagt
ggagggcagaagagaaagctgtcgataggaatcgctgttcttgggagcccaaaggtttta
cttttggatgaaccaactgctggtatggacccatgttctcggcacattgtttggaatctc
ctgaaaaacagacaagccaatcgggtaacagtattcagtactcatttcatggatgaagca
gatattcttgctgatcgaaaagctgtgatttctcaagggatgctgaaatgtgttggctcg
tctctcttcctcaaaaccaaatggggaattggctaccgcttgagtatgcatatagatggg
tattgcaatatagaagctacaacagccttgatcagacagcatatccctggagccagcttg
gtacaacagaatgaactgcagcttgtgtataccttaccttttaaagacatggacaagttt
tcaggattattttctgatctagacactcattcacatttgggtgttattacttatggagtt
tccatgacaaccttggaggatgtgttcctgaagctggaaattgaagcagaaattgatcaa
gcagattatagcatatttaattcccagtcagcaggcgaggaaatggatacaaaatcattt
gatgagatggaacaaagcctactgatactctctgagacgaaatcatctgcagtaagcaat
accgctctctggaaacagcaggtgtctactatagcaaaggttcatttccttaacttaaga
cgtgaaaataagtcagtgggaattatgttgttgctttttttagtttttcttgcagttcag
attttaatgtttcttatacatcactacttcaaaaattctgtggttcccatcaaactttcc
ccagatttgtactttctgaagcctggagaaaaatacaacaagtacaaaacaaatctcctc
cttcagaactccacaggatcaaatattgatgatctcatcagtgctctcagaagccagaag
atattgactgagatgttcaatgacagtgattacgtgtcggctgcacctcacagtgcagct
ttaaatgtgtcgctttcagaacagagctccatttttacagctgtattcaacagtactatg
gtgcactctctgcctgttttgatgaacatcattagcaacctgtttctccgcaacttaaat
gtgactgagaatattcaaatctggagtaatccattcattcaagagactgatgacacagtt
ttcagactggaggcttttttccaagcgatgttactaggaatcattgtaacgggggtgcca
ccatattttgcgatggaaaatgcagaaaaccataagatcaaagcctacactcagcttaag
atctccggtctttatccatctgcttactggagtggacaagccgtcattgactttccttta
tttttcattattcttgttctgatgataggaagcttatttgcatttcatcatagtgtttat
ttcgatacttggaagttccttgctgttatcttctgccttattggctatgtaccatcagta
gtgctgttcacttatgtgctctctttcacctttaaaaaagtgcaaaataccaaagaattt
tggtcgtttattttttcaatgactgctttgatctctactgctgtcactgaagtagcattc
tttctgagatatttcatagtaaccaccattttgcattatgtcttctgtgccttcattccc
atctatcctcttattggatgcctgattacttttataaaggtatcatggaaacacctacaa
aagaatgaaaaataccatgacccctgggacaaactcttggtagcagttatcacgccttat
ttgcagtgtgtagtgtggctgttcctcctgcgatatcttgaagtgaaaaatggaggtaaa
tcgataagagaggacccatttttcagaactactacaaagatcaaaacatggaaatttcaa
gatgatccacataatgagaatgaggatgaagacgtaaaggcagagaggttgtgggttaaa
gaaaagacaagctgccagagctgtgatgagaaaccagcaattctggtcagcagtctgcat
aaagaatatgatgaaaggaaggattttcttcttgggagaaaaataaagaaagtggcaact
aaacacgtctctttttgcgtaaaaaaaggagaaatacttggattgctaggaccaaatgga
gctggaaaaagcacactgattaacatgctagtgggagacgttgaaccaactgctggccag
gtgctgatgggagactgttctttaggattgaatagtgaggatcattctgctaaatttgtg
ggatattgtcctcaagtaaatccactttggccagatattacgttgcaggagcattttgaa
atatatggatctgtcaaaggaatgagtaaaactgatgtggaagaagttgtaaaacgcatt
gcaagtgcccttgagttgaaaaaccatctacagaaaacaacaaagaaattagtggttgga
attaaacgcaagttgtgttttgcgctaagtatgctgggtaatccccagattacgttgcta
gatgaaccatctactggtatggatcctaaagccaaacaacacatgtggagggcaattcga
gcagcatttaaaagcaaagagagagcagctattctgaccactcattatatggaagaggct
gaagctgtgtgtgatcgagttgcaatcctcgtgtctggacagttaaggtgtattggttca
gttcagcatctaaagagcaaatttggcagaggctatttcttggaaattaaattaaaagaa
acagcaggcgtacaacaggtggcgtttcttcacaggcagattttgcacatcttcccaaat
gcaaatcatcaggaaagttttgcctccattttggcatataaaattcctaaggaagatgta
cagtcgctctctcagtctttttctaaactggaagaagccaaacatgcctttaatatcgag
gagtacagcttttctcaagcaaccctggaacaggtttttgtggagcttgctaaagaacaa
gaagaggaagataacagttttggaaccttaaacagcacactttggtgggaaagaacacag
gaagacagagtcattttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (52)   

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