KEGG   Chelonia mydas (green sea turtle): 102930925
Entry
102930925         CDS       T02989                                 
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X4
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03440  Homologous recombination
cmy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102930925 (BRIP1)
   03460 Fanconi anemia pathway
    102930925 (BRIP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmy03400]
    102930925 (BRIP1)
Enzymes [BR:cmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     102930925 (BRIP1)
DNA repair and recombination proteins [BR:cmy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     102930925 (BRIP1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     102930925 (BRIP1)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD ResIII
Other DBs
NCBI-GeneID: 102930925
NCBI-ProteinID: XP_027675953
Position
17:5676236..5806835
AA seq 1282 aa
MSLVVSEYTIGGVKIVFPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSV
LSWQQSLHEKSLDEFSCEKECKKPETSLPCHCRCHSQAVANDTTADVNRGASCSFTTCKA
ATSVKSETPSTDKVMNTPATEHNTKVTLSSKLSAKKWASLHADENDDFQVDRKRIRLLET
EQQVRKRHCFAKGVQFVDALEVYQQRRNGELTVHSEKIAAFSPKTSPGLCTQCSCSSVKE
NGKNVSYAKRKENGGKPHIPKIFFGTRTHKQIAQITRELQRTVYSSVRMTILSSRDHTCV
HPVVSRSSNRNEKCADLLEGKNSGSCVYYHGVHKISEHHALQFARKKCQAWDIEDLVSLG
KKLRACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKDQVVILDEAHNIEDCARE
SASYSVTETQLRFAREELDTMVVNNIRRKDHDPLRAVCYSLMNWLQESSGQLKERGYETS
CKVWSGKEMLTILHNMGITNATFPILQKHFAAVLEKEEKVSNLHGGDELIEVPIVSPATQ
IMLKGLFMVLLYLFKDNNRFADDYRVALQQTYVWTNEKQLDIPDKNAFFAQPKHQRSSRQ
KTAVHTLNFWCLNPAVAFSDLSGNVRTIVLTSGTLSPMDSFSSELGVKFTIQLEANHVIR
NSQVWVGTIGAGPKGRKLHATFQHTETFEFQDEVGALLLSVCQTVDQGVLCFLPSYKLLD
KLKDRWMHTGLWRNLELVKTVIAEPKGGDKADFDALLQLYYDAIKYKGGKDGALLIAVCR
GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRKYNDQHSKTRGLLPGSQWYEIQAY
RALNQALGRCIRHKKDWGALMLVDDRFRSNPNKYITGLSKWIRQQIQHHENFSTALDSLD
AFAKKNQVGASSSTQCNSESLLIHSSSKDLSPTSSYEASIHLSPDVPVESKVQNLVLEAH
SPTAINTVNSTASSQSSNSMGTKKNGQNFGVENHSHRTVWREKQMDSKPKSPALKKEREK
RNSWTNADLMKQYFSNKPVTSTPLPVNEKKSISKTMDKQKRSTIESSQPVVNGCQCQSSL
LTEHTPSGPALQLETTSSSIKKGEAAATEEYPASQQLCTSGVIDQCIELSPVRGKIELST
LNVAIEAEAEDDSIYFTPELYDDIESEEQQIEPLIQTCNNTVNQNEHGACIVAEDLFEIS
TSKAVSSTKEIKSNDNMNTELAIIVQNDKIKGNTVSDAESITRVGEVEQKIYQEMDTRKK
KSKLSRSRNKGVSSFSLSNTSP
NT seq 3849 nt   +upstreamnt  +downstreamnt
atgtctttggtagtgtcagaatataccattggtggggtgaagattgtctttccttgcaag
gcttacccttcacagcttgctatgatgaatgcaattgttaaggggttaaattccaggcaa
cattgtttgttggagagccccacaggaagtggtaaaagtttggcgttactttgttctgta
ttatcatggcagcagtctctgcatgagaagtcactggatgagttctcatgtgaaaaggag
tgcaaaaaaccagagacttcattgccatgtcactgtagatgccattcgcaggctgtggct
aatgacactactgcagatgtgaaccgaggtgcttcttgttctttcactacttgtaaagca
gcaacctccgtaaaaagtgaaacaccatcaacagacaaagtaatgaatactcctgctaca
gaacataatacaaaagtcacactgtcttcaaaattatctgcaaagaaatgggcatcttta
catgcagatgaaaatgacgactttcaagtagacaggaaaaggatacgtttattagaaact
gagcagcaggtaagaaaacgtcattgttttgcaaaaggagtgcagtttgtcgatgctttg
gaagtttatcaacagcgaagaaatggggaactgactgttcactcagaaaaaattgctgct
ttctctccaaaaacatctcctggcctctgtacacagtgttcctgttcttctgtaaaagaa
aatggtaaaaatgttagttatgcaaagaggaaggaaaatggaggaaagccacacatcccc
aaaatattttttggaactcgaacacacaagcaaatagctcagattactagagagctgcag
aggacagtatactccagtgtccgtatgacaattctttccagccgggatcatacctgtgtt
catccagtggtatcgagaagtagtaacaggaatgaaaaatgtgcagacttgctggaagga
aaaaatagcgggtcctgtgtttactaccatggtgtgcataaaattagtgaacatcatgct
ctacagtttgcgcgtaagaagtgtcaggcttgggacatagaagatctagtaagcctggga
aagaagctacgtgcatgtgcctattttgcagctcgagaactcatggtgggggcagatatt
gtattttgtccttacaactacctgctggacccacaaataagagagagtatggagattaac
ctaaaagaccaagtagtcattttagatgaagctcataatattgaagattgtgcacgggag
tcagccagttatagtgttacagaaacacagctgagatttgctcgagaagaacttgatacc
atggtcgtcaacaacatcagacggaaggaccatgatcccctgcgggctgtgtgctacagt
ctgatgaattggctacaggaaagctctggtcaacttaaagaaaggggatatgaaacctcc
tgtaaagtttggagtggaaaggaaatgctcaccattttgcacaatatgggaataacaaat
gctacatttcctatcctgcagaaacattttgctgctgtccttgaaaaagaagaaaaagta
tcgaatcttcatggaggagatgagcttattgaggttcctattgtgagccctgccactcag
attatgctaaaagggctattcatggttctactatatctttttaaagataacaacagattt
gcagatgactacagagttgctttgcaacaaacatatgtttggacaaatgaaaagcaactt
gatattccagataaaaatgctttctttgcacaaccaaaacatcagaggagttcacggcag
aaaacagcagtccatacgcttaacttttggtgcttgaatccagctgtggccttttcagat
ttaagtggtaatgtcaggacaattgttctcacgtctggtacgctctctccaatggactca
ttttcttcagaacttggtgtgaagtttactatccaacttgaggcaaatcatgttattcgt
aactctcaggtttgggttggcaccattggggcaggccccaagggtcggaagctgcatgcc
acattccagcatacagagacctttgaattccaggatgaagtgggagcacttctgctttct
gtgtgtcaaactgttgaccaaggggtcttatgctttttgccatcttataaattgctggat
aaattaaaagatcgctggatgcacactggtttatggagaaacttggagctggttaagaca
gtcattgcagagcctaaaggaggagacaaggctgactttgatgcactgctccaattatac
tatgatgcaataaaatataaaggaggaaaagatggagcacttctgatagcagtatgcaga
ggtaaagttagtgaaggcttggatttctctgatgacaatgcccgtgctgttataactatt
ggtattccatttccaaatgtgaaagaccttcaggttgagttaaagaggaaatacaatgac
cagcactcaaagacaagaggccttttaccaggtagccaatggtatgaaattcaagcttat
agagctctcaaccaggcactcggcaggtgtattcgtcacaaaaaggattggggtgctctt
atgttagttgatgaccgcttcaggagtaaccctaataaatacataactggattatccaaa
tggattcgtcaacaaatccagcaccatgagaactttagtactgcactcgattcgttggat
gcatttgctaaaaaaaatcaagtgggcgccagttcttcaacccagtgtaatagtgaatct
ctgctcatacattcaagttcaaaagatctgtcaccaacttcgtcatatgaggcatctatt
catctatcaccagatgttcctgttgaaagtaaggtgcagaatttggtcctggaagctcat
tcacccacagcaatcaacacagttaattctacagcatccagtcaatcaagtaacagcatg
ggaacaaagaaaaatggtcagaattttggtgtagaaaatcattctcaccgaacagtgtgg
agagaaaaacagatggattccaaaccaaaaagtcctgccctcaaaaaagaaagagagaaa
aggaatagttggactaacgctgaccttatgaaacaatacttcagcaataagccagtgact
tcaacacctctgcctgtgaatgaaaagaaatccatctccaaaaccatggacaaacaaaaa
aggagtactattgaatctagtcagcctgttgttaatggatgccagtgccagtcgtcattg
ctaacggaacatacaccgagtggaccggcattacaactggaaacaactagttcctcaata
aaaaagggtgaggctgcagctactgaagaatatcctgcttcacagcaactctgcactagt
ggagtcatagatcaatgcattgagttatctccagtaagaggaaaaattgaactttcaacg
ttaaatgtagccatagaagcagaagctgaggatgacagtatctattttacacctgaactt
tatgatgatatagaatcagaggaacagcaaattgaaccattaattcagacttgtaataat
actgtgaatcagaatgaacatggagcttgcattgtagctgaagatctttttgaaatcagt
acttcaaaagcagtaagctcaactaaagaaataaaaagtaatgataacatgaacacagag
ttagctataatagtgcaaaatgacaagattaagggtaatacagttagtgatgctgaaagt
attactagagtaggagaagtggaacagaaaatatatcaggaaatggacaccagaaaaaag
aaaagtaaactttccagatcacgaaacaaaggtgtgtcttccttctcattgagcaatact
agtccatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (65)   

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