KEGG   Chelonia mydas (green sea turtle): 102937802
Entry
102937802         CDS       T02989                                 
Symbol
PDE12
Name
(RefSeq) 2',5'-phosphodiesterase 12
  KO
K19612  2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102937802 (PDE12)
   03029 Mitochondrial biogenesis [BR:cmy03029]
    102937802 (PDE12)
Enzymes [BR:cmy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     102937802 (PDE12)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     102937802 (PDE12)
Mitochondrial biogenesis [BR:cmy03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    102937802 (PDE12)
SSDB
Motif
Pfam: PDE12-like_N Exo_endo_phos
Other DBs
NCBI-GeneID: 102937802
NCBI-ProteinID: XP_037760813
Position
7:complement(24555069..24563202)
AA seq 616 aa
MNGGCRAGWFMWSLLWGELRAATGPRRLRCRSAAFLSRGGDAVPPGPVCGDPPGHMERAV
VRCVPSEPKMSLWFVLCDGSAKHMQRDQTEPLGRALARIATNAGKGHAKAAKKSKKARAE
AGPAGEPVPTAPLAVRLFSRDGESVAEDVSNAEAWQDGAVLQIGEVKYRVERNPPSVIEL
QLPRSLLAGFPVCPKIHTEFGAPQHCLFRWYREQPGGGGDEPSPGGAIWVEAPVRDRVFT
PTNAHIGLRLKLHCTPGNSQQRYGLPREVESSGPVEAGPGACTFDSRHLYTKKVSGEGLI
RTVSYNVLADIYAQTEHSRTVLYPYCAPYALELDYRQNLLKKELAGYSADLICLQEVDKS
VFADSLAPALDAFGLEGLFRIKEKQHEGLATFYRRDKFSLLSEHDIAFNEALVSDPLHKE
LRDKLAPYRLAQEKVLQRSSVLQVSVLQSTNDPSRKICIANTHLYWHPKGGNIRLIQIAV
ALSHIRHVTCDLYPGIPVIFCGDFNSTPSTGMYRFINSGSIAEDHEDWVSNGEEERCNMS
LTHPFKLQSACGEPAYTNYVGGFHGCLDYIFIDINALEVEQVIPLPSHEEVTTHQALPSV
SHPSDHIALICDLKWK
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgaatggtggatgccgggcgggctggttcatgtggagccttctgtggggggagctacga
gccgctaccggcccgaggaggctccgctgccgatcggccgctttccttagccgcggcggc
gacgcggttccccccggccctgtctgcggagacccgcctggccacatggagcgggctgtc
gtgcgctgcgtcccgtcggagcctaagatgagcctgtggttcgtgctgtgtgacgggagc
gccaagcacatgcagcgggaccagacggagccgctaggccgggcgttggcccgcatcgcc
accaacgccggcaagggccacgccaaggcggccaagaagagcaagaaagcgcgggcggag
gcgggcccggccggggagccggtgccgacggcgccgctcgccgtgcgcctcttctcgcgg
gacggggagtccgtggctgaggacgtgtccaatgccgaggcctggcaggacggcgccgtg
ctgcagatcggcgaagtcaagtaccgggtggagcggaacccgccgtcagtcatcgagctc
cagctgcctcgctcgctgctcgccggcttccccgtctgccccaagatccacaccgaattc
ggcgcgccccagcactgcctcttccgctggtaccgggagcagccaggcggcggcggggac
gagccctccccggggggcgccatctgggtagaagccccggtccgggaccgcgtcttcacg
ccgaccaacgcgcatatcggactgcgcctcaagcttcactgcaccccgggcaacagccag
cagcgctacgggctcccccgggaggtggaaagcagcggccccgtggaggccgggcccggc
gcctgtaccttcgactcccggcacctctacaccaagaaggtgtccggggaaggcttaatc
cgcaccgtctcctacaacgttctggccgacatctatgctcagaccgagcactcgcggacc
gtgctctacccctactgcgcgccctacgcgctggagctcgactaccggcagaacctgctc
aagaaggagctggccggctacagcgccgatctcatctgcttgcaggaggtggacaagtcc
gtcttcgccgatagcttggccccggcgctggacgctttcggcctcgaggggctcttcagg
atcaaggagaagcagcatgaaggcttggccactttctaccgcagggataagttcagcctg
cttagcgagcacgatatcgccttcaatgaggccctggtctccgacccactacacaaggag
ctgcgggacaagctagccccctaccgcttagcccaggagaaggtgctgcagagatcttct
gtgctgcaggtttcagttcttcagtctacgaatgatccttcaaggaagatttgtatagct
aatactcatctatactggcatccaaaaggtggaaacatccgtctcatccaaattgctgta
gctttgtctcatattaggcatgttacatgtgatctgtatcctggcatacctgtcatattc
tgcggtgattttaatagtacaccttcaactggaatgtataggtttatcaacagtggcagt
attgctgaggatcatgaagactgggtctctaatggagaagaagaaagatgcaatatgtct
ctaactcatcctttcaaactgcaaagtgcttgtggagaaccggcttatacaaattatgtt
ggtgggtttcatggatgcctggactacatattcattgacataaatgctttagaggttgaa
caagtaattccattgccaagtcatgaagaagttaccacccatcaggccttgccaagtgtg
tctcatccttcagatcatatagcattaatatgtgatttaaagtggaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system