KEGG   Chelonia mydas (green sea turtle): 102939257
Entry
102939257         CDS       T02989                                 
Name
(RefSeq) cartilage oligomeric matrix protein
  KO
K04659  thrombospondin 2/3/4/5
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04145  Phagosome
cmy04510  Focal adhesion
cmy04512  ECM-receptor interaction
cmy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102939257
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102939257
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102939257
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102939257
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmy04131]
    102939257
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmy04147]
    102939257
   00536 Glycosaminoglycan binding proteins [BR:cmy00536]
    102939257
Membrane trafficking [BR:cmy04131]
 Endocytosis
  Phagocytosis
   Opsonins
    102939257
Exosome [BR:cmy04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102939257
  Exosomal proteins of colorectal cancer cells
   102939257
  Exosomal proteins of bladder cancer cells
   102939257
Glycosaminoglycan binding proteins [BR:cmy00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102939257
SSDB
Motif
Pfam: TSP_C TSP_3 EGF_CA COMP EGF_3 cEGF EGF
Other DBs
NCBI-GeneID: 102939257
NCBI-ProteinID: XP_027690204
Position
25:14336513..14357082
AA seq 766 aa
MISTLAFIFLLSLCCPFASSQTTSVGGDDVGRQMLTEMRETNLALKEVRDLLKQQIKEIT
FLKNTVMECDACGMNTGATGPRITITQFPRCLSNPCFPGVTCTETGSGFRCGPCPLGFTG
NGTHCTDINECSTNPCFPRVNCVNTAPGFHCDPCPPGYTGPAPEGVGLAFARANKQVCTD
INECETDSAKACVPNSICINTRGSYKCGSCKPGFVGDQIIGCRSQTERRCSNGQLSPCHE
KAHCIVERDGTISCVCIVGWAGNGYVCGRDTDIDGFPDEKLRCTDQKCRKDNCVTVPNSG
QEDADRDGIGDACDDDADGDGILNAEDNCVLVRNADQRNTDKDSFGDACDNCRHVKNNDQ
QDSDSDGKGDACDDDIDGDKIKNVVDNCKKTPNPDQKDSDGDGVGDVCDSCPTISNPDQK
DADHDLVGDLCDTNQDRDGDGHQDSQDNCPSVPNSSQLDTDHDGIGDECDDDDDNDGIPD
LRPPGPDNCRLVPNPGQDDSDRDGVGDLCEDDFDKDQVIDRIDVCPENAEVTLTDFRAFQ
TVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDD
YAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLW
HTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEMVADSGVILDT
TMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRTQLDQPTA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgatttcgactctagccttcatttttctcctaagcctctgttgtccttttgcatcaagt
cagacgacaagcgtaggaggagatgatgtcgggcgccagatgctcacagagatgagagaa
actaacctggcactgaaggaagtcagagatttgctgaagcagcagattaaggagatcacg
ttcctgaaaaacacagtcatggagtgtgatgcctgcggcatgaacaccggggcaactggc
ccaaggatcaccataacacaatttcccagatgtttgtcaaacccttgtttccctggagtt
acctgcacagagactggctctggcttccgctgtggaccctgccccctgggcttcacaggc
aacgggacccactgcacagacataaatgagtgcagcacgaatccctgcttcccaagagtc
aactgcgttaacactgcccctggcttccattgtgacccctgtcccccgggctacactggg
ccagcacccgaaggggttgggctagcattcgccagagctaacaaacaggtttgcacagac
atcaatgagtgtgagacagacagcgccaaggcttgcgtcccaaactccatctgcatcaac
acacggggatcctacaagtgcgggtcttgtaagcctggctttgttggggaccagattatt
gggtgccggagccagacggagagacgctgttccaacgggcaactcagtccgtgccatgag
aaagctcactgcattgttgaacgtgatgggaccatctcatgtgtgtgcattgtcgggtgg
gccgggaacggctacgtctgcgggagggacacagacatcgatggattcccggatgagaag
ctgcgctgcacagaccaaaaatgccgcaaggataactgcgtgaccgtccccaactccggc
caggaggacgcggacagggatggcatcggcgacgcgtgtgatgacgacgctgatggagat
gggatattaaatgctgaggacaactgcgtcctcgtgcgcaatgcggaccagcgcaacaca
gacaaggacagcttcggcgacgcctgtgacaactgccggcacgtgaagaacaacgaccag
caggacagcgacagcgacgggaagggagacgcgtgtgacgatgacatagatggagacaag
atcaaaaacgtggtggacaactgtaaaaaaacccccaaccctgatcagaaagacagcgat
ggggacggagtgggggacgtgtgtgacagctgccccaccatcagtaacccagaccagaaa
gatgctgaccatgaccttgtgggggacctgtgtgacaccaaccaggaccgagacggggac
ggccaccaggactcccaggataactgcccctcagtgcccaatagctcccagctggacacg
gaccacgacgggattggagatgaatgtgatgacgacgatgacaatgatgggattccggat
ctaagacctcctggccctgacaactgccggctagtccccaaccctggccaagacgattca
gaccgtgatggtgtgggggatctctgtgaagatgactttgacaaggaccaggtgattgac
agaatcgacgtgtgcccagagaatgcagaggtgactctgacagatttcagggctttccag
acagtcgtgttggaccctgagggcgacgcacagattgaccctaactggattgtcctcaat
cagggcatggaaattgtccagaccatgaacagcgatcctggcctggcagtgggttacact
gcattcaacggggtggatttcgagggcaccttccacgtgaacactgccacagacgacgat
tacgcaggctttatcttcggctaccaggacagctccagtttctacgtggtgatgtggaag
cagatggagcagacgtactggcaggcaaaccccttccgtgcagtagcagagcccggaatt
cagctgaaggcagtgaaatctaaaacagggccaggagaatatctccgtaattccctttgg
cacactggagacactacagaccaggtcaaactgctatggaaagaccccaggaattccggc
tggaaggacaagacctcgtatcgttggttcctacagcaccggcctcaagttggatacatc
agagctcgcttctatgaaggccctgaaatggtagcagacagcggagtcatccttgataca
accatgcgagggggtcgtctgggggtattctgcttctcccaggagaacattatctggtcc
aacctgcgttaccgctgcaatgataccattcctgaagattatgaaacattccgaactcag
ctggaccagcccacagcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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