KEGG   Chelonia mydas (green sea turtle): 102944897
Entry
102944897         CDS       T02989                                 
Symbol
RECQL4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X2
  KO
K10730  ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmy03032]
    102944897 (RECQL4)
   03400 DNA repair and recombination proteins [BR:cmy03400]
    102944897 (RECQL4)
Enzymes [BR:cmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102944897 (RECQL4)
DNA replication proteins [BR:cmy03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    102944897 (RECQL4)
DNA repair and recombination proteins [BR:cmy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     102944897 (RECQL4)
SSDB
Motif
Pfam: Helicase_C DEAD Drc1-Sld2 zf-CCHC zf-CCHC_3 zf-CCHC_5 ResIII zf-CCHC_2
Other DBs
NCBI-GeneID: 102944897
NCBI-ProteinID: XP_037747793
Position
2:complement(3610185..3655795)
AA seq 1463 aa
MDRYNEVKVLLKKWETTFLQEHQRKPSKTDMEEAPEETKKLYREYKVLKQAREHQGLPES
SSVCQQAAKETPAVEQAPDSGCWGAHLNRGQTAPRLSPQDRDTLKASAQYFGMKLKANLG
AAIKEHPITLRKSLTPRGKPAVLLLEKSSENSNQGASPKPPQMPSLKSDKDCVTNSDPNE
PGDLLLPPSISGLAPTILSGGLKPSPEVNKFQQLKQTVAQRLGSLDPGWLDRCQGIREKA
GERPREESASTSNGRNKDQTKAGPALQANVDQSLHDHSLNQTTGVRAQSLESENVPPLGN
CPLGSWKLQKHWDPSRRNRQGAALEGDDLIKGGGNDYRVAVKDEQGTSETQGNGRMDSTL
GATEISIAKECVSKPKNLPKDAHQGAEQEKLGNTSGGEGGASCRTGAGPSQPKKVKETHK
KRQRTATASKDDGAVAPKRRRTNASARDNPVSVKKKVRGAICEPKPGESNLEEDGEPVEV
KEEKGRDVPMLSENLLGEVEGEGKHKWSSRASVCRAPVKKDGNFVRLNLKKKSHVKGYAL
RGHRLRKQVWKQKWQKKGEWFGGGGKCFDRGSDTCFRCGGTGHWASECKGRGLAPAVDPQ
LEENSEAIEEEMPLPTLEEVARMTNTAYSKISAESRSGQAGPERAGEGEFDLHMQRPVYE
PPAPPPPMEPLYGLGQDGKVRETPQEVFRALSELGYSAFRPGQEVAVMRILSGLSTLVVL
STGMGKSLCYQLPAYLYGKRSKCITLVISPLVSLMDDQVSGLPPHLKAVCIHSNMSKSQR
EAAIERVKGGKVHVLLLSPEALVGGGRAGSSCLPSADQLPPVAFACIDEAHCVSEWSHNF
RPCYLRLCKVLRDRLGVRCLLGLTATATLATAQDVAHHLGIQEEEGIAVRSAAVPPNLHL
SVSTDRDKDQALVSLLQGERFGGLDSVIVYCTRREETTRIAALIRTRLQGVTLRESMTAA
EQQHDDSAGKRKKAKAKKSIRCLLKWVADSYHGGMSATERRRVQNNFMCGQLRIVVATVA
FGMGLDKSDVRGIVHYNMPKNFESYVQEIGRAGRDGKPAHCHLFLDPEGGDLHELRRHIY
ADTVDFFTIKKLVQKVFPRCKCLELHRKQQDLSRGGEVLDAELMELVGAGKEQACRDDGM
RGQQRVCYKHERAVPVQQTVESLDIREEGIETLLCYLELHPQCWVELLHPTFSSCRVVCY
GGPQQLRATAKSSPPIAVCLARERLAGVDHTHASSVEFDVIALSDSMGWEVLPVKRALRQ
LQWNTQLQKGCHGTGKSGVLVEFSDLSFHLRSYGDLTDQEMDSVCSFLHHRVTARETTTL
CQLQACFRAFQSVACQASALYSERVDEERSSQLKALLIDYFEKKPVLDETELMRGEEEEA
EDLSNIKLREWEGQIRSDIRNFLSIRQDEKFSGRAIARIFHGIGSPCYPAQVYGRDRRFW
RKYIHFDFNKIMRLATEEIIRCK
NT seq 4392 nt   +upstreamnt  +downstreamnt
atggacagatacaacgaggtcaaagtcctgctgaaaaaatgggagacgacatttcttcag
gagcaccagaggaaaccgagcaagactgatatggaagaggctccagaggagacaaagaaa
ctataccgagagtataaagtgctaaagcaagcaagagagcatcaaggcctccccgaatcc
agctcagtctgccagcaagctgctaaagaaaccccagccgtggaacaggctccggactca
ggttgctggggcgcgcatctgaatcgagggcagacagcccccaggctgagcccccaagac
cgtgacaccctaaaggcatctgcgcagtattttggaatgaagctaaaagccaacctggga
gcggccataaaggagcatcctataactttgaggaagtccttgactccccgagggaagcca
gctgtgctcctgttggagaagagctcggaaaacagcaaccagggtgcatctccaaagccc
ccccagatgccatcgctgaaaagcgacaaagactgcgttactaactctgatcctaacgag
ccaggagacctcctcctcccgccatcgatatcggggctggcccccaccatcctctctgga
gggctgaagccgagccctgaggtaaataaattccagcaactgaagcagacggtggcccag
agactgggctccctggatcctggctggctggacaggtgtcagggcatcagggagaaagca
ggggagagaccaagagaggaaagtgcttctacctcaaatggcaggaacaaagatcagaca
aaagcaggccctgccctgcaggcgaatgttgaccaatctctgcatgaccattccctgaac
caaaccactggagttagggctcagtccctggaaagcgagaatgttccacctcttggaaac
tgccccctggggagctggaagctgcagaaacactgggatccttctaggagaaaccggcaa
ggagctgccctggagggggatgatctaattaaaggtggtggaaatgactacagggtggct
gtgaaggatgagcagggtactagtgaaacccaagggaatggcaggatggactcaacgctt
ggtgctactgaaatcagcattgccaaagaatgtgtcagtaaacctaagaatctcccaaag
gatgcccatcagggagcagagcaggaaaagcttgggaacacttcaggaggggaaggagga
gcctcttgtagaacaggggccgggcccagtcaacccaagaaggtcaaagagacccataaa
aagaggcagcgaactgccacagccagcaaagatgatggtgctgtggcgccaaagcgcagg
cggactaatgcatcagccagagacaaccccgtctccgtgaagaagaaagtgagaggggcc
atctgtgagccaaagccaggcgaaagcaacttggaagaggatggggagcctgtggaggtt
aaagaggagaagggaagggatgtgccaatgctctctgaaaacctccttggagaagtcgaa
ggggaggggaagcacaaatggagcagcagagccagcgtctgcagggcccctgtaaagaaa
gacggcaactttgtcagactcaacctgaagaagaaatctcacgttaaaggttacgcgttg
agaggacatcgccttcgcaagcaggtgtggaagcagaagtggcagaagaaaggcgaatgg
tttggaggaggtggcaaatgcttcgacaggggctcagatacctgcttcagatgcggcgga
acggggcactgggcctcggagtgtaagggcagagggctagctccagctgttgacccacag
ctggaggaaaacagcgaagctattgaagaggagatgccattgcccactctggaagaagtg
gcccggatgactaacacggcttacagcaagatctcagctgagagcagaagcggccaagcc
gggcccgagagggctggcgagggggagttcgacctgcacatgcagaggcccgtgtatgag
ccacccgctccgcccccaccaatggagcctctctatgggctggggcaggatgggaaggtg
cgagagactccacaggaggtgtttcgagctctgtctgagctgggatacagtgccttccgc
ccgggccaggaggtggctgtcatgaggattctctcaggtctgtccacgctggtcgtcctg
tcgacggggatggggaagtcactgtgctaccagctccctgcgtacttgtatggcaagcgg
tccaagtgcatcaccctggtgatctccccacttgtgtcgctgatggatgaccaggtttca
gggcttcccccccacctgaaggcggtctgcattcactccaacatgtcgaagagccagcga
gaggctgctatagaaagggtgaagggagggaaggtgcatgtgctgttgctctccccggag
gccctggtgggcggaggcagggcgggatctagctgtctcccctctgccgaccagctcccc
cccgtggcgtttgcctgtatcgatgaagcgcactgtgtctccgagtggtcccacaacttc
cgcccatgctacctgcggctctgtaaggttcttcgggatcgcctaggggtgcgctgcctt
ctgggccttacggccacggccacactagccacagcccaggatgtggcccatcacttgggt
atccaggaggaggaagggatagccgtgcgctctgctgctgttcccccaaacctgcacctt
tcggtctcgacggacagggacaaggatcaggccctggtctcgttgctgcagggagagagg
tttgggggcctggactcggtcattgtttactgcacacggcgagaggagacaacccggatt
gcagcactgatccgcacgcgcctccagggcgtgacgctcagggagtccatgactgctgcg
gagcagcagcatgacgatagcgctgggaagaggaagaaagccaaggctaagaaaagcatc
cggtgccttctgaagtgggtcgccgattcctaccacggtggcatgtctgccaccgagcgc
cgccgggtccagaacaacttcatgtgcggccagctgcggatcgtggtggccacggtggcc
tttggcatggggctagacaagtccgacgtgcgtgggatcgtgcactacaacatgcccaag
aactttgagagctacgtgcaggagattgggcgggcgggacgggacgggaagccagcgcat
tgccatctcttcttggatccggagggcggggatctgcacgagctcaggcgacacatctac
gccgacacagtggattttttcaccattaagaagctagtgcagaaggttttccctcgctgt
aagtgcctggagcttcaccgcaaacaacaggacctcagcagggggggcgaggtgttggac
gctgagctgatggagctcgtgggagccggtaaggagcaggcatgtcgggatgacgggatg
agagggcagcagcgcgtgtgttacaaacacgagcgtgccgtccccgtgcagcagacggtg
gaatccctggacatccgagaggaaggcatcgagaccctgctgtgttacctggagctgcat
ccacagtgctgggtggagctgctgcaccccactttctcctcctgccgggtggtgtgttac
gggggcccccagcagctcagggcaaccgcaaaaagctccccgcccatcgcagtgtgtctg
gcccgggagcgtctggcaggggtggatcacacgcacgccagctctgtggagttcgacgtg
atcgcactcagcgactccatgggctgggaggttctgccggtgaagcgagccctgcgccag
ctccagtggaacacacagctacagaaaggttgccatggcactgggaagagcggtgtcctg
gtggagttcagcgacctgtcctttcacctgcgctcctacggagacctcacagaccaggaa
atggactctgtgtgcagcttcctgcaccaccgggtgacggcgcgggaaacgaccactctc
tgccagctccaagcctgcttcagggccttccagagtgtggcctgccaagccagcgccctg
tattcggagcgtgtggacgaggagaggagctcccagctgaaggccttgttaatagactat
tttgagaagaaacctgtgctggacgagaccgagctaatgcgcggggaagaagaggaggca
gaagatctcagtaacattaaactgcgggagtgggaagggcaaatccgctcggacatccgg
aatttcctgtccatccgccaggatgagaagttctctggcagagctattgccaggatattt
catggcattgggagcccatgttaccctgcccaggtctatggacgagaccgcaggttctgg
aggaaatacatccactttgacttcaataaaatcatgcgcctggccacggaggagattatc
cgatgcaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (55)   

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