KEGG   Chelonia mydas (green sea turtle): 102947286
Entry
102947286         CDS       T02989                                 
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
  KO
K14438  chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmy03036]
    102947286 (CHD9)
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    102947286 (CHD9)
SSDB
Motif
Pfam: SNF2-rel_dom BRK Helicase_C Chromo ResIII DEAD HDA2-3
Other DBs
NCBI-GeneID: 102947286
NCBI-ProteinID: XP_037734173
Position
12:complement(13402852..13584855)
AA seq 2892 aa
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDTQ
TQQKMSEFEQLNQYDSLKLQVNQSFSSPADSVLSPHTQFNCSPIHPQNQSNGMFPDVADG
SPMWGHQTTTTVPNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEQQHQCASLQSQQS
RNNINTGQDALNQPKNFMEVNISAPRRVSVTHPPQIANPSTLQQPLSVQQFSQNASASIH
FCGNQEGNYDGQSPTMTPCSVNNTQRFPSPYSYSNNHISPTSLLQSSTALSTSQQTHPLS
DYTGSDAFTSQTGTKQETTEHLLNPNTPLNSNSFQMLHSAHPQGSFSSSKLSPVNINFPA
SAGSASQISHFSDPIESNGFSSLDENLLHQVESQAEPFTGLDPEDLLQEDLLPQFDDSAF
VQDTSSHILEHDLEHHITPQQITQSSDIARTESQSQMHPWHSSVSNRHLQDRNRIALQGQ
PPSSKKTDVSGTYTKLQNTQVRAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERN
IPRVMSPENFPSVSAEGREEKKGRKIKCKPKDKESKKTKTGSSSKIKDKTKIGKLIITLG
KKQKRKNESSDEMSDTKQTPQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSV
KIKKSSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISAGMTMEEEEFFVKYKN
YSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVS
FCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPP
NSWKKLEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEI
LLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRI
IRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKV
LLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRK
CCNHPYLIKGAEEKILGEFRETYIPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVL
IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASL
KLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQI
LQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNS
LVIDTPRIRKQTRPFSATKDELAELSEAESEGDDKPKLRRPCDRSSGYGRTECFRVEKNL
LVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTED
GQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKH
HCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASEVDVWVPEPEHSEVPAEWWDADADKS
LLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPA
MFKDDMEDDASSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQ
QIQPTFPVQATVMQPPYEEAALNPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDPDGG
RFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPTIFIQPITEERAS
RTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRT
DYHILRDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALSASPLAPQSRLLDTKGNAL
EDTKVKNENLKEDPQSSEEESMSTEETRTMMKSEPLSPKNGTPLQTTDHKPGVKTETDRR
MVAARTEPLTPNPASKKQRVNKRGSDSSSDSDSESDRSSCSSRSSSSSSSSSSSCSRSQS
GSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDDEEAQKRAEGTPHIKAYDEESV
ASLSTTQDETQDCFQLNNGTPNSNYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKW
PSARRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPTAGVKEEHDQSPQMPKVKKHV
REKEFTVKINDEGGLKLTFQKQGFSQKRLFESEEGTLGQQQYLARLRELQNASETSLVNF
PKSLPESGASSQLTVNANGVMVDSQPVVKKRRGRRKNVEGVDILFINRNKPPNHVSPGIN
TSQVAPVINPTLTYAQSQGLLDEESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYV
EDLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPL
KDLCRFLKENPEYGVAPEWGDVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAK
ATAAAAAAATAANVSVNPLLANGLLPGVDLSTLQALQQNLQNLQSLQVTAGLMGMPAGLT
TGGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEKKGNDSKEPVVKKERTEN
QHADNGGEDSVSSSPSTSSAAANPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFD
VQNAENNDTGSSKPTEEKEKNSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTS
SSSEDSDSSDED
NT seq 8679 nt   +upstreamnt  +downstreamnt
atgactgatcctatgatggatttttttgatgatgccaacctttttagcgagacgttagaa
ggtttgtcggatgatgcctttgtacaacctggacccgtttcactagttgatgaattgaac
ttgggtgcagaatttgagcctttgcacatagactcattgaaccatgtgcaagatactcaa
actcaacaaaagatgagtgaatttgagcagttaaatcagtatgattcattgaaacttcaa
gtaaatcagtctttcagcagtccagctgacagtgttttatcaccacacactcaatttaat
tgctcaccaatccatccacaaaaccaatccaatggaatgtttcctgatgtggctgatggt
agtcctatgtggggtcatcaaactaccacaactgttccaaatcaaaatgggtcccctttt
caccaaggacattctcagtctatgcagcaaaataaaagttttgtagcacaccatgacttt
gccttatttcaggccaacgaacagcagcatcagtgtgcctcactacagtctcaacaaagc
agaaacaacattaacacagggcaagatgctctgaatcagccaaaaaactttatggaggtt
aacatatctgctccacgcagagtcagtgttactcatccacctcaaattgctaatccatca
actttacagcagcctctctctgttcaacagttttctcaaaatgccagtgcttcaatacat
ttttgtgggaatcaagaaggaaactatgatggacaatctccaactatgactccttgctct
gttaataatacacagcggtttccttctccatattcttactctaataaccacatttctcct
actagccttctacagtcttctactgctctttctactagccaacaaactcatcctttatct
gattatactggaagtgatgcctttacatctcaaacagggaccaagcaagaaaccaccgag
cacctcttgaatcctaacacacctttgaattcaaatagtttccagatgttgcattcagca
catcctcagggcagcttcagtagttcaaaactctctcctgtgaacattaattttccagcc
tctgcgggttctgcttctcagataagccatttcagtgatcctatagaaagcaatggtttt
tcatctttggatgagaacttacttcatcaagttgagtctcaagctgaaccatttacagga
cttgatccagaggacctccttcaggaagacctcctaccccaatttgatgattcagcattt
gttcaggacacttcaagccacatattagagcatgacctagaacaccatattaccccacag
caaataacacagtcatctgatattgctcggacagagtctcaaagtcagatgcatccctgg
cattcttcagtttctaatcggcatctacaagatagaaatcgtatagccttgcaagggcag
cctccttcctccaagaaaactgatgtttcagggacatatactaaattgcagaatacccag
gtgagggcaatgtcggaaaagaaacagaagaaaaaagtagaatcggaaagtaagcaggag
aaggctaatcgcataatatcggaggcaatcgcaaaagcaaaagagagaggggagagaaac
attccacgagtaatgagccctgaaaacttccccagtgtttcggctgaaggaagagaggaa
aagaaaggtagaaaaattaaatgcaaaccaaaggacaaggagagcaaaaaaactaaaact
ggttcctcatccaaaattaaagacaaaacaaaaattggcaagcttataatcacattgggt
aaaaagcagaagagaaagaatgagtcttcagatgaaatgtctgatactaagcagactcca
cagcggtcatttaaagatgaggactctcagaagagaagatcaaatcgtcaagttaaaaga
aaaaagtatgctgaagaaggagaaggaaaacagtcagaggaagaggctaaagtttctgtg
aaaatcaaaaagagttctgctcctttgcctgctgagcaacccttacaattatttgtggag
aatccaagtgaagaagatgcagcaattgtagataaaattttatcctccaggatagtgaag
aaagaaatatctgctggaatgacaatggaagaagaagaattttttgtaaaatacaagaac
tactcctatcttcactgtgaatgggccacagaacagcagcttctgaaggataaaagaatc
cagcagaaaattaaacggttcaagctgaggcaagcacaaagagcccacttttttgcagat
atggaagaagaaccttttaatcctgactatgttgaagtggaccgggtgttagaagtgtcc
ttttgtgaagataaggacactggtgagcctgttatttactacctagtaaaatggtgttca
ttgccatatgaggacagcacctgggagttaaaagaagatgtagaccaggcaaaaatagaa
gaatttgaacaactgcaagcttccaggcctgattcaaggagactggaccgacctcctcct
aactcctggaagaagctagaacagtccagagaatataaaaatggcaaccagctcagggaa
taccaactggaaggactcaactggctccttttcaactggtacaatagacgaaactgcatt
ttagcagatgaaatgggtcttggcaaaaccatccagtcaattacattcctctatgaaatc
ctcctgactggtatacgagggccttttctgatcatagctccactttccactataaccaat
tgggaaagagaatttcgcacgtggactgatcttaatgtcgtggtatatcatgggagcatg
gttagcaggcagatgatacagcagtacgagatgtacttcagggactcacaggggcgtatc
attcgaggtacttaccggttccaagctattatcaccacttttgaaatgattcttggtggc
tgtccagaactcaatgcaattgaatggcggtgtgttattattgatgaagcgcacaggctg
aagaataaaaattgcaaactcctggagggactcaaactcatgaatcttgagcacaaagtg
ctgttgacaggcacgccactgcagaacacagtagaagaactgtttagcctccttcatttt
cttgaacctttgcgttttcctgctgaatctacattcatgcaggaatttggggaccttaaa
acggaggagcaggtgcaaaagttacaagctatcctgaaaccaatgatgctgagacggttg
aaggaagatgtagagaaaaagttagctcccaaggaagaaactataattgaagtagaacta
actaatatccagaagaaatattatcgggcaattttggagaagaactttgcattcttgtcg
aaaggagctggccaagctaatgtacccaatctagttaacactatgatggaactcagaaag
tgctgcaaccacccttatcttatcaaaggtgctgaagagaaaatccttggggagtttagg
gaaacatatatcccaactgctcctgattttcatctacaagcaatgatccagtctgctggt
aaattggtcctcattgataaacttcttccaaaaatgaaagcaggaggccataaggtgctt
atcttctctcaaatggtgcgctgtcttgacatccttgaggactaccttatacataaaagg
tacttatatgaaagaattgatgggagagtgagaggaaatctgaggcaagctgctattgat
cggtttagcaaaccagactctgatcggtttgtgtttcttctgtgtaccagagctggtgga
ttaggcattaatttgactgcagctgatacatgtataatttttgattctgactggaatcct
cagaatgatctccaggcccaagcccgttgtcacaggattggtcagaacaaagcagtaaag
gtctacagattgataactcggaactcatatgagagagagatgtttgacagagcaagtctg
aaattgggtctggataaagctgtcttgcagagcatgagtggaagagaaaatagtgttggt
ggtatccaacagctttccaaaaaagaaatagaagacctgcttcgaaggggtgcctatggt
gctattatggatgaagaggatgagggctctaaattctgtgaagaagacatagaccaaatc
ttgcagcgccgtacgaaaactatcacaattgaatccgaaggaaggggttcaacgtttgcc
aaggctagttttgttgcatctggaaataggactgatatttcattagatgatcccaacttc
tggcagaaatgggccaaaaaagcagaaatagatatagatgccatcagtggtagaaacagc
ctggttattgataccccaagaattaggaagcaaacaagaccctttagtgccacaaaagat
gagctggctgagttatcagaagcagagagtgaaggggatgataaaccaaaactccgcagg
ccttgtgaccgctctagtggatatggaagaacagagtgctttcgggtggagaaaaactta
ttagtctatgggtggggtcgttggagagagattttgtcacacggtcgcttcaagaggcaa
ctaaatgaacaggacgtggagataatttgccgagcactcttagcgtattgccttgttcac
tacagaggagatgaaaagataaaaagttttatatgggatctcatcaccccaacagaggat
gggcaaacacgagagctgcagaatcacctaggtttgtcagcacctgtgccgaggggtaga
aaaggaaagaaagtgaagactcaggctagcacttttgatatacataaagcagaatggctt
cgaaaatataatccggaacatctactgcaagatgaaggatataaaaaacacataaagcat
cactgcaataaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcatt
ggtaatgaatgccaaaaagtgtttgatggagttgatgccagtgaagttgatgtttgggtc
cctgagccagagcattctgaggtccctgcagagtggtgggatgcagatgcagataaatcc
ctcctaattggagtttttaagcatgggtatgaaaagtacaacactattagagcagatcct
gcactctgtttcttggaaagagtgggcaaaccagatgagaaagcagttgctgctgaacag
agagcaaatgattacattgatggggatgtagaagatccagaatataaaccagccccagca
atgtttaaagatgatatggaggatgatgcttcatcaccaggagatctagtaatagctgac
ggagacggtcagatgatggaaggagacaaaatttattggcccactcagtctgctttaaca
acacgtctgcgccgcctaataacagcctaccaacgtactagtaagaacaggcaggcccag
caaatccaaccaacgtttccagttcaggccactgtgatgcagcctccatatgaagaagct
gctctaaatccaaaaattgctgccaagattgaaaggcaacaaaggtggacgagaagagaa
gaagctgatttttacagggttgtatccacatttggagtggtgttcgatcctgacgggggt
cgatttgactggacaaaatttagagccatggctaggctacataagaaaactgatgagagt
ttagagaagtacttgtatgcttttatgtctatgtgcaggagagtctgtcgccttccctca
aaagaagaacttgtagacccaaccatttttatccaaccaattaccgaggagcgtgcttct
cggaccttatatcgcattgaactcttgaggaaggtacgagaacaggctctccgacatcca
cagctgtttgaacgcttgaaactttgtcagccaaatccagacttgccagtctggtgggag
tgtgggactcatgacagggatttacttattggagctgctaaacatggggttagcagaaca
gactatcacattcttcgtgatcctgaactctcatttatgtctgcccagaggaactacagt
cagaataaagtggcactatcaagaacttctactccacttttacatcagtatcagatggca
ttgtctgcttctcctcttgcacctcagtcaagattgctagatactaaagggaatgctctt
gaggatacaaaagttaaaaatgaaaaccttaaagaggaccctcagtcgtctgaagaagaa
tctatgtctactgaggaaacacggacaatgatgaaatctgaacctttgagcccaaagaat
ggcacgccattacagactacagaccacaaacctggcgtgaaaactgaaactgacaggcgt
atggttgcagcaaggacagagcccctaactccaaaccctgcttccaaaaaacagagagtc
aacaaaagagggtcagactctagctctgattctgactctgagtcagacagatcatcctgt
tcttccaggtcatcttcatcatcctcttcctcttcctcttcttgttcacgctcccaatca
ggatccagctcttcttcatcctcatcttgttcttcagcatcttcctcctcttcatcatct
tcatcttcttcatcatcgtcgtcgtcgtcgtcatctgaagagagtgacagtgatgacgaa
gaggcacaaaagcgagcagaaggaacccctcacatcaaagcatatgacgaagagagcgta
gcctctctgagcaccacacaagatgagacccaggactgtttccagttgaacaacgggacg
ccaaattccaactatctcttgcaaggtggatacatgttggctgcatcctattggccaaag
gatcgagttatgattaaccgactagacagtatttgtcaaacagtgttgaaaggtaaatgg
ccttcggcaagaagaagctatgacagcaatacagtagcatctttctacacaaccaaactt
ctggacagcccgggtgcagctgcagactacagcgaacctagtgcaccaacacccccaact
gcaggtgttaaggaagaacatgatcagtcgccacagatgccaaaggtgaagaagcatgta
cgagaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaagttgacttttcag
aagcaggggttttctcaaaaaaggctgtttgaaagtgaagaaggcacgttaggacagcag
caatacctggctcggcttcgtgagctccagaatgcttcagagaccagccttgtcaatttt
ccaaaatccttaccagaatcaggtgcttccagtcagttaacagttaatgctaatggagtg
atggtcgacagccagcctgtagtcaaaaagaggagaggaaggaggaagaatgtagaagga
gttgacatcctctttataaatagaaataaaccacctaatcatgttagtccaggcattaac
acctcgcaagttgctccagtaataaacccaacacttacttatgctcagtcccaaggtcta
cttgatgaagaaagcccagttcctgtcattaacctgaaagatggaacaagacttgcaggt
gatgatgcaccaaaaaggaaggatttagaaaaatggcttaaggaacatcctggttatgtt
gaagatttaggagcttttattcctagaatgcagcttcatgatgggaggcccaaacaaaaa
aggcatcgttgtcgaaaccctaataaactggatgttaatagtctcactggtgaagaacgt
gttcagctgatcaatagaagaaatgctagaaaggtgggaggtgcttttgctccaccgctg
aaggacttgtgcagattcttgaaagaaaatcctgagtatggagtagctcctgaatgggga
gatgttgtgaaacagtctggatttcttcctgaaggtatgtttgaccgaattctcactggg
cctgttgtacgagaagaagtaagcaggagagggagacggcctaaaagtgagattgccaag
gcaacagctgcagcagcagcagctgcaacagcagcaaatgtttcggtcaaccctttgcta
gccaatggattacttccaggagtggatctatctactcttcaggccttacaacaaaacctg
cagaacttgcaatcgctgcaagtaacagcaggattaatgggaatgcctgctggactaact
actggaggagaagctaagaatatggctgccatgtttcccatgctactgtcaggaatggct
ggattaccaaacttgctgggtatgggaggactcctaacaaagtcaacagaatctgtttca
gaggagaaaaagggaaatgactcaaaagagccagttgtaaagaaagaaaggacagaaaac
caacatgcagataatggtggtgaagactctgtgtcaagttctccctctacgtcctctgct
gctgccaaccctttagctcttaacccattacttttgtccaatatactttatccagggatg
cttctcactccaggccttaatcttcatatcccagcattgtcccaatccaatatttttgat
gtacagaatgctgaaaacaatgacacaggctcatccaagcctacagaagaaaaggagaaa
aattctagggttagagatcaggaagacaaagggggaacagagccaagctctcataatgaa
aacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagtacatcg
tcttcatctgaggattcagattctagtgatgaagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (13)   
   RefSeq(pep) (13)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (7)   
   Pfam (7)   
All databases (73)   

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