KEGG   Chelonia mydas (green sea turtle): 102948258
Entry
102948258         CDS       T02989                                 
Name
(RefSeq) tubulin alpha-3 chain isoform X1
  KO
K07374  tubulin alpha
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04145  Phagosome
cmy04210  Apoptosis
cmy04530  Tight junction
cmy04540  Gap junction
cmy04814  Motor proteins
cmy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102948258
  09143 Cell growth and death
   04210 Apoptosis
    102948258
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102948258
   04540 Gap junction
    102948258
  09142 Cell motility
   04814 Motor proteins
    102948258
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102948258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102948258
   03036 Chromosome and associated proteins [BR:cmy03036]
    102948258
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cmy04812]
    102948258
   04147 Exosome [BR:cmy04147]
    102948258
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102948258
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     102948258
Cytoskeleton proteins [BR:cmy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    102948258
Exosome [BR:cmy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102948258
  Exosomal proteins of other body fluids (saliva and urine)
   102948258
  Exosomal proteins of colorectal cancer cells
   102948258
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 102948258
NCBI-ProteinID: XP_037765426
Position
9:complement(28180793..28191198)
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgaatgtatctctatccatgttggtcaagctggtgttcagattggcaatgcatgc
tgggaattatattgtcttgaacatggaatccagcctgatggtcagatgcccagtgacaaa
accattggaggtggagatgattcattcaatactttcttcagtgagacaggggctggtaaa
catgtgcccagagctgtatttgtggaccttgaaccaactgtggttgatgaagtacgtaca
ggcacttacaggcaactattccatcctgaacagctcattactgggaaagaggatgcggct
aataattatgccagaggccattacaccattggaaaagagattgttgatctagtgctagat
cgcattcgcaagctggctgatctgtgcacagggctgcagggattcctcatcttccatagt
tttggaggaggcactggctctggatttgcatctctactcatggaaaggctttctgttgat
tatggcaaaaagtccaaactagagtttgcaatttacccagcaccacaggtttctactgct
gtagtggaaccctacaactccatcctaactacgcacacaacattggagcattctgactgt
gccttcatggtagacaatgaagccatttatgatatatgtcgtcgcaatctagacattgag
cgtcctacttacaccaacctaaatcgactcattgggcaaattgtctcatccatcacagct
tcactgcgttttgatggagctctcaatgtagatctgaccgagttccagaccaatcttgtc
ccatacccacgaatccatttcccactggcaacatatgcacctgtcatctctgctgaaaaa
gcataccatgagcagttgtctgtggctgaaattaccaatgcttgttttgagccagccaac
cagatggtaaaatgtgaccctcgccatggcaagtatatggcctgctgtatgttatacagg
ggtgatgttgttcccaaagatgttaatgcagccattgccactatcaagactaagcgaaca
attcagtttgtggattggtgtccaactggattcaaggtgggcattaactaccaacctccc
actgtagtgccaggaggcgacttggccaaggtgcagcgtgctgtgtgtatgttgagtaat
acaactgctattgcagaagcctgggcacgtcttgaccataaatttgatttgatgtatgct
aagcgtgcctttgtacactggtatgttggagaagggatggaggaaggagaattttctgaa
gcccgggaagatttggctgcgcttgagaaagattatgaagaagtgggtgtagattctgtg
gaagcagaagctgaagaaggggaggaatattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (1530)   
   KEGG ORTHOLOGY (1)   
   RefGene (1526)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (1549)   

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