KEGG   Chelonia mydas (green sea turtle): 102948326
Entry
102948326         CDS       T02989                                 
Name
(RefSeq) LOW QUALITY PROTEIN: caspase-1
  KO
K01370  caspase 1 [EC:3.4.22.36]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04148  Efferocytosis
cmy04217  Necroptosis
cmy04621  NOD-like receptor signaling pathway
cmy04623  Cytosolic DNA-sensing pathway
cmy04625  C-type lectin receptor signaling pathway
cmy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102948326
  09143 Cell growth and death
   04217 Necroptosis
    102948326
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    102948326
   04623 Cytosolic DNA-sensing pathway
    102948326
   04625 C-type lectin receptor signaling pathway
    102948326
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102948326
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cmy01002]
    102948326
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmy04131]
    102948326
Enzymes [BR:cmy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.36  caspase-1
     102948326
Peptidases and inhibitors [BR:cmy01002]
 Cysteine peptidases
  Family C14: caspase family
   102948326
Membrane trafficking [BR:cmy04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    102948326
SSDB
Motif
Pfam: Peptidase_C14 CARD
Other DBs
NCBI-GeneID: 102948326
NCBI-ProteinID: XP_043387240
Position
17:complement(23531903..23553570)
AA seq 451 aa
MWPTGRSLPTSGLGGDLYRDRLSQGCYCGVPASALKHLMMATARHXVRAKWTSLAIPVFL
FLYSWTQSPSGIDWDRKLSNVRIRFLESVSKAVISTLLDDLLERRVLNEEEVEEVRESCS
KRSDQARCLIDGVRKKGARASEIFIERLCFRDVHLATELELSPPSGSAAETQPAPSQEWI
CPCPQEFVQRIQKEEAKEIYSIRDKATRTRLALIICNVEFDHLRRRDGADVDMNGMKRLL
EGLGYKVEIHCNLNAQAMVETLKQFAARNEHRTSDSTFLVLMSHGVRAGLCGTNCQDEST
DILPIDTIYSTFNNRNCQALLEKPKXIIIQACRGNHGQVWVSDSAELPGDGSSLAPLPPE
GLEDDASHQIHVESDFICFQATTPDTLSWRSPKTGSVFITSLIEQLRTNAWCLPLEEIFR
KVQLSFQNFPRQMPTKERTTMIKKFYLFPGH
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgtggcccacgggccgtagtttgcccacctctggattaggaggagatctttacagggac
agattatcccagggatgctactgcggggttcctgcatctgccctgaagcatctgatgatg
gccactgcccgacacnnggtacgggctaaatggaccagtctggcaattcctgtgttccta
ttcttgtactcctggacgcagtctccttctgggattgattgggaccggaagttaagcaac
gtgcggatcaggtttttggagagtgtgagcaaggctgtgatcagcaccctcctggacgac
ctgctggagagacgggtgctgaacgaggaggaagtggaggaggtgagggagagctgcagt
aagaggagtgaccaagcccggtgtctgattgatggggtgaggaaaaagggtgccagagcc
agtgaaatattcatcgagcgcctctgcttcagagatgtccacctggccacagagctggag
ctcagccccccctcggggtctgctgcagaaacccagccagcgccatctcaggaatggatc
tgtccctgcccccaggaattcgtccagcggatccagaaggaggaagcaaaggagatctat
tccatccgggacaaggcgacgcgaacccgcctggccctcatcatctgtaatgttgagttt
gaccatctgcgcaggagggacggggctgacgtggacatgaatgggatgaagaggcttcta
gaagggctgggatacaaggtggaaatccactgcaacttaaatgcccaggccatggtggag
accctgaagcagtttgctgctcggaacgagcaccggacctcggatagcaccttcctcgtg
ctcatgtctcatggcgtcagggctggcctgtgcgggacaaattgccaagacgagtccaca
gacatccttcccattgacaccatctacagcaccttcaacaacaggaactgccaggcactg
ctggaaaaacccaagntgatcatcattcaggcctgccgtgggaaccacggacaggtgtgg
gtgagtgactctgcagagctcccgggagatggctccagccttgctccgctgccccctgaa
gggttagaagatgatgcaagtcaccaaatccacgtggagagcgatttcatctgtttccaa
gctacaacgccagacactttgtcctggagatctccaaaaactggctccgtcttcatcacc
tccctgatagagcagctccgaaccaatgcctggtgcctccccttggaggagatcttccga
aaggtccagctctcttttcaaaattttcctcgtcagatgcccacaaaggaaagaacaacc
atgataaaaaagttctatctgttcccaggccattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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