KEGG   Croceicoccus naphthovorans: AB433_06795
Entry
AB433_06795       CDS       T03964                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cna  Croceicoccus naphthovorans
Pathway
cna03410  Base excision repair
cna03430  Mismatch repair
cna03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AB433_06795
   03430 Mismatch repair
    AB433_06795
   03440 Homologous recombination
    AB433_06795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cna03400]
    AB433_06795
DNA repair and recombination proteins [BR:cna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AB433_06795
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AB433_06795
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AB433_06795
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: AKM11611
UniProt: A0A0G3XLW2
Position
complement(1350614..1352317)
AA seq 567 aa
MALGSGGMQAGEDLLTQIFTARGIAPDDIERHRTPTLRGFLPDPSIFADMDAAADRLAQA
VLSGEPITVYGDYDVDGATSSALLTRLLRDLGADPGQYIPDRLLEGYGPSGEALVRLGEQ
GSSLIVTVDCGAMAHEALAMAHDAGIEVIVVDHHKCAAENPRAVALVNPNRLDSSDEAAS
YGHLAAVGVAFLLGVALLRTLRQRGFFADRPEPDLRGLLDLVALGTVADVAALHGLNRAF
VAQGLKIMARRDNIGLAALIDASRLNRAPQCSDLGFALGPRINAGGRVGESTLGVRLLAG
VDQAEVRDIAARLDALNEERRAIEADVQEAAEAQIAGQHNRAVVVLSGRGWHPGVIGIVA
GRIKEKTGKPTIVIAFDEAGEGKGSGRSISGVDLGAAIIAARGEGLLVKGGGHAMAAGMT
VEEAKIDALADWLDSHLARDVERARASQAMLVDLSVSPRGLQPDLVSLLETAGPYGVGWP
APRVAVGPVTLVKADVVGRGHVRVIASGADGARFKAIAFRAEESDMGQVLLHGSRGRKLW
LVGRAKIDDWGSTPAAELHIEDAAFAD
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggcgttggggtccggcgggatgcaggcgggtgaagatctgctgacccagatcttcacc
gcgcgcggcatcgcgcccgacgatatagagcggcaccgtacgcctaccttgcgcggattt
ctgcccgatccgtcgatttttgccgatatggatgccgccgccgaccggcttgcgcaggcg
gtgctgagcggcgagccgatcacggtctacggtgactacgacgtcgatggggcgaccagc
agcgcgcttctgacgcgcttgctgcgcgatctgggggccgatccggggcaatatatcccc
gaccgcttgctggagggatatggcccttccggcgaggcactggtccgtctgggcgagcaa
ggcagcagcctgatcgtcaccgtcgactgcggtgcgatggcgcatgaggcgctggccatg
gcgcacgatgccgggatcgaggtcattgtagtcgatcaccacaagtgcgcagcggagaac
ccgcgcgcggtggccctggtcaatccgaaccgtttggattctagcgacgaggcagcctcg
tacggccaccttgccgccgtgggtgtcgcgttcctgctgggcgttgccctgctgcgcact
ttgcgccagcgcggtttcttcgcggatcgccccgaaccggatctgcgcggactgctcgac
ctcgttgccctgggcacggtggccgacgtagccgcgctgcatggcctgaatcgcgccttc
gtagcgcagggtctgaagatcatggcccggcgcgacaacatcgggctggctgcgctgatc
gacgcaagccgcctgaatcgcgccccgcaatgcagcgaccttggattcgcgcttggcccc
cgcatcaacgccggtggccgtgtaggcgaatcgactctgggcgtgcgactgctggccggt
gtggaccaggccgaggtgcgcgatattgcagctcggctagacgcgctgaatgaggaacgc
cgcgcgatcgaggcggacgtacaagaagcggcggaggcccagatcgcaggccagcataac
cgcgcggtcgtggtgctttcggggcgcggctggcaccccggggtgattggcattgtggct
ggacgcatcaaggaaaagaccggcaagcccaccatcgttatcgctttcgacgaagctggc
gagggcaaggggtctggccgctccatttccggcgtcgaccttggcgcggcgatcatcgcg
gcgcgtggtgaaggcctgttggtcaagggcggcggtcacgcgatggcggcaggcatgacc
gtggaagaggccaagatcgacgctctcgccgactggcttgattcgcaccttgcccgagat
gtcgaacgcgcacgggcctcgcaggcgatgctggtcgatctttccgtcagtccccgtggg
ctgcaacccgatctcgtctcgctgctggaaaccgcaggtccctacggtgtcggctggcct
gccccgcgcgtggcggtcgggccggttacgctcgtcaaagccgatgttgtcggtcgcggc
catgtgcgcgtgatcgccagcggagcggatggcgcgcggttcaaggctatcgcctttcgc
gccgaggaaagcgacatggggcaggttttgctgcacgggtcgcggggccgaaaactgtgg
ctggtgggccgtgcgaagatcgacgactggggcagcacccccgcggcagagctgcatatc
gaggatgcagcatttgccgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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