KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBC1360
Entry
CNBC1360          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cnb03016]
    CNBC1360
Enzymes [BR:cnb01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     CNBC1360
Transfer RNA biogenesis [BR:cnb03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    CNBC1360
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N Nop25
Other DBs
NCBI-GeneID: 4934801
NCBI-ProteinID: XP_776643
Position
3:382462..384461
AA seq 533 aa
MAQQQPQLKLPPRARYAANNRKYGTPLPILFPSSSSASSKSILTSFLPSLSSARVEIQHI
TGEYDPTTGSVWITDPKMMDLAFQKGFFGKGSLSRSEPSWRSRRIGLLKGGDTLAAEQMR
EKRRLERKQFKIDRAQAMLDAAKKAEAIVAAAKSQPEPKAQSQLQPGDNEGDDVEDGEGE
GDEADVSLVVTPDNEVDLEGEAETQSQLPAGGEALASQSQIEIDPLSLTPQTFLVRPTRP
DANRNRGRNAFRRRPPQSQAQAQVQDNTDTSVATPAVVTAPSTEQTTQAPADADVDMEAE
EDLFDESLVEEMEYLQLSIEESLFLSLAIGVLRVYDPSTGMYLTPTSNSADAGELLKLLL
PRPSPSSPLSAQLSVSEGKGAPLLPDNPALVSYAVYHHFRSLGWVVKDGIKFCVDWLLYR
RGPVFSHSAFACVIIPVYADTHDQAVSPYGGEDWYEEKMSWKWMNTVIRVNALVQKNVIA
VYITIPPISSFPSNLKLADGTLDPKKNDLKSLLKSYTIREVALTRFGATRRRD
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcccaacagcaaccgcagttgaaacttccaccgagggcccgatacgcagccaataac
cgtaaatacggcacacctctgcctatcctattcccctcttcctcctccgcatcttccaaa
tccatcctcacatctttccttccgtctctatcctctgctagagttgaaatccagcatatc
acaggcgaatatgatccaactacaggaagtgtatggataacagacccgaaaatgatggat
ttggcttttcaaaaaggtttctttgggaaaggtagcctgagtaggagtgaaccgagttgg
cggtcgaggaggattggattgttgaaaggtggtgatactctagcggcagagcaaatgcgc
gagaagaggcgattagagcgtaagcaattcaagattgatagggcgcaagcaatgctggat
gcggccaaaaaggcggaagccatcgtagcggctgcaaaatctcaaccggaaccgaaagcg
caatctcaacttcaacctggtgataacgaaggggacgatgtagaagatggcgaaggagaa
ggggacgaagcagacgtctcgctcgtggtcactcccgataatgaggtcgacttggaggga
gaagcggaaacacaatcacaattaccagccgggggagaagcattggccagccaaagccaa
atcgagattgatccactcagcttgacgccgcagacgttccttgtccgaccgacaaggccg
gatgcgaatcggaatagggggagaaatgcttttcgtcggcgaccccctcaatctcaggct
caagctcaggttcaggacaatactgatacatctgtggccactcccgccgttgttaccgca
ccctcgaccgaacaaactacccaagcccccgccgacgctgacgtcgatatggaagccgaa
gaggacctatttgacgaatccctcgttgaagagatggaatatctccaactctccatcgaa
gaatccctcttcctctccctagccatcggggtgcttcgtgtgtacgatccttccactggc
atgtacctcaccccgacatcgaactctgcggatgcaggcgagctattgaaattgctcctc
cctaggccctcaccgtcttcacctctttctgcccaattgtctgtctctgagggtaaagga
gcaccgttattgccggataaccctgcactagttagttatgcggtgtaccaccatttcaga
agtctgggctgggttgtgaaggatggcatcaagttctgtgtagattggcttttgtaccgc
cgaggaccagtgttttcccattctgctttcgcgtgcgttatcatccctgtgtatgctgat
acgcatgaccaagcggtttcaccgtatgggggggaggattggtatgaagaaaagatgagt
tggaagtggatgaacaccgttatcagggtgaatgcgctcgtacaaaagaacgtcatcgca
gtttatatcactataccgcctatttcttccttcccatccaacttgaagttagcggatggc
accctcgatccaaagaagaatgatctcaagagtctgttaaagagctataccattcgagaa
gtagcgcttacgaggtttggagctacaagacgacgtgattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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