KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBF3900
Entry
CNBF3900          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CNBF3900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBF3900
Enzymes [BR:cnb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     CNBF3900
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CNBF3900
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 4936942
NCBI-ProteinID: XP_774711
Position
6:1152646..1154631
AA seq 468 aa
MPSDSENAPSPASKAFADRLAKYAYVSTSSSPSPRMNPLRRSTRSQTSISDAAKPSIPLT
TSQERIYDRGSPLKKVASSSSSSISLSATKKRSAKSISKEDDEFQDVDTEKETDDEDYKG
GRLNSGNLKGGRKSPMKKGIKKPRGYAAPEMYEHLRPLNDLLVKGQDLVFCGINPGKMSS
TLGHHFAHPTNKFWKALYQSGLTSRLMSPTEDYKVVDEYNYGLTNLVGRPTSEQSELSTL
EMKLNTINLLQKFIKYQPSVVCFVGKKIWDVFESVVGKTAEFDETVKQKVKLEGEVENGE
GSGDGGKGRSVVTLAPTPERGTVKIEPAELGDQPSLFPLSASPSKTPQLTPAQTASLSPA
KARAKKGAIKPPKTPFSFSQPRALRIPHPPEENGGEIKYTYFFVVPSTSGLERTPFPEQV
ANFAALKALVDELKKGRSLQGDFLNISVEGVEGTVEDMRRAAILKNAL
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgccaagcgacagcgaaaatgccccaagcccagcatccaaagcgtttgcagaccgtcta
gccaaatacgcctacgtctcaacctcttcttcgccttcacctcggatgaaccctctcaga
cgctccacacgatcacaaacctcaatttcagacgccgctaagccgtctatacctttaaca
acatctcaagagaggatatacgatagaggatcacccctgaaaaaagtagcttcatcctcg
tcttcttccatatcgttgtccgcgacaaagaagcgctcagcaaaatcaatctcaaaggag
gacgacgagtttcaagatgtcgatactgaaaaagagaccgatgatgaggattacaaagga
gggagattaaattcggggaatctgaaaggcgggagaaaatcaccgatgaagaaaggaatc
aagaagccaaggggttacgctgctcccgaaatgtatgagcatctcagaccgctgaatgac
ttgttagttaagggacaagatttggtgttttgtggtatcaatccagggaaaatgtcttct
actttgggccatcatttcgcccatccaaccaacaagttttggaaagctctttatcagtcg
gggcttacttcaagattgatgtcgccgactgaagattataaagtcgtcgacgagtataac
tatggtctcaccaaccttgtgggcagaccgacttccgagcaaagtgaattatctaccctg
gaaatgaagctgaacactatcaacttgttacaaaagttcataaaataccagcccagtgtc
gtctgttttgtggggaagaagatctgggatgtatttgagagtgtagttgggaagacggcc
gagtttgacgagactgtgaaacaaaaggtcaagctggagggtgaagttgaaaatggagaa
ggcagcggtgacgggggaaaaggaaggagcgtggtgacactcgctccgacaccggaaaga
ggaacggtcaagatcgagccggccgaactgggtgatcagccgtccctatttccactctcg
gccagtccatcgaaaaccccgcaacttacaccggcccaaactgcttcactctctccagcc
aaagctagagcgaaaaaaggagctatcaagcctccaaaaacaccctttagcttctcccaa
cctcgtgcactgagaattccgcatcctcctgaagagaatggaggtgaaatcaagtatacg
tatttctttgtggtaccgagtacttcggggctggaaaggacaccttttccggaacaagtg
gccaattttgcagccctcaaggcattggtggatgagctgaaaaagggtagatccctgcag
ggcgattttctgaatatcagcgtggaaggtgtagagggtactgtggaagatatgcggcgg
gcagctatcttaaaaaatgctctatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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