KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBI2080
Entry
CNBI2080          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03020  RNA polymerase
cnb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNBI2080
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBI2080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBI2080
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBI2080
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CNBI2080
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNBI2080
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Anti-TRAP Ogr_Delta DZR C1_1 Zn_ribbon_recom DUF1062 zinc_ribbon_10 CEBP_ZZ
Other DBs
NCBI-GeneID: 4938168
NCBI-ProteinID: XP_773594
Position
9:complement(576131..576856)
AA seq 123 aa
MPTLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATVEPGMAGCVYKHDLLTVAREQ
PGETKDLDTDPTLQRSAIECPACHHHGAVFFQDQGRRITTNMTLFYYCTNCKHLFRDPTV
RHR
NT seq 372 nt   +upstreamnt  +downstreamnt
atgccaactcttaagttctgtggcgaatgcaacaaccttctttaccccaaatccgataac
aacgccaaagttctcctctatcagtgccggaattgcaactatacagaaaatgctacagta
gaacctggaatggcgggatgtgtgtacaagcatgatctcttaacggtcgccagagaacaa
cccggagaaacgaaggatctggacacggatcccacccttcaacgttcggccattgagtgc
cccgcttgtcatcatcatggtgctgttttcttccaagatcagggtcgtcgtatcacaaca
aatatgactcttttctactattgcaccaactgtaaacatcttttccgagatcctactgtc
agacaccgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system