KEGG   Cupriavidus necator N-1: CNE_2c10580
Entry
CNE_2c10580       CDS       T01564                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoyl dehydrogenase PdhD
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cnc  Cupriavidus necator N-1
Pathway
cnc00010  Glycolysis / Gluconeogenesis
cnc00020  Citrate cycle (TCA cycle)
cnc00260  Glycine, serine and threonine metabolism
cnc00280  Valine, leucine and isoleucine degradation
cnc00310  Lysine degradation
cnc00380  Tryptophan metabolism
cnc00620  Pyruvate metabolism
cnc00630  Glyoxylate and dicarboxylate metabolism
cnc00640  Propanoate metabolism
cnc00785  Lipoic acid metabolism
cnc01100  Metabolic pathways
cnc01110  Biosynthesis of secondary metabolites
cnc01120  Microbial metabolism in diverse environments
cnc01200  Carbon metabolism
cnc01210  2-Oxocarboxylic acid metabolism
cnc01240  Biosynthesis of cofactors
Module
cnc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cnc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cnc_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
cnc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cnc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cnc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CNE_2c10580 (pdhD)
   00020 Citrate cycle (TCA cycle)
    CNE_2c10580 (pdhD)
   00620 Pyruvate metabolism
    CNE_2c10580 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    CNE_2c10580 (pdhD)
   00640 Propanoate metabolism
    CNE_2c10580 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CNE_2c10580 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    CNE_2c10580 (pdhD)
   00310 Lysine degradation
    CNE_2c10580 (pdhD)
   00380 Tryptophan metabolism
    CNE_2c10580 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CNE_2c10580 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cnc04147]
    CNE_2c10580 (pdhD)
Enzymes [BR:cnc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CNE_2c10580 (pdhD)
Exosome [BR:cnc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CNE_2c10580 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA Pyr_redox_3 AlaDh_PNT_C FAD_binding_2 Thi4 HI0933_like Lys_Orn_oxgnase NAD_binding_8 FAD_oxidored Lycopene_cycl FAD_binding_3
Other DBs
NCBI-ProteinID: AEI80025
UniProt: F8GTR8
Position
2:1127085..1128476
AA seq 463 aa
MTTIQTDVAVIGAGTAGLAAYRAAIAAGKRAVIIEGGPYGTTCARVGCMPSKLLIAAAEA
AHELRHTAPFGVHVDGQVRIDGREVMARVRSERDRFVGFVVRGVESIPEADRIRGYARFI
DNTTLEVDGHTIVRASRVVIATGSTPMLPAPFQVFGDRLIVNDDVFAWEDLPASVVVFGP
GVIGLELGQALSRLGVRVRVFGVSGSLGPLTDPVIRAYAAKTFNGEFYVDPDAKVTDMAR
DGDQVVVTYLDREGRSVTERFDYALVATGRVPNVRGLGLEHAGLALDARGVPLFDARTLQ
CGNAPVFIAGDANNILPLLHEAADEGKAAGENAASYPQVKPLARRAPIAVVFTDPQIAMV
GQRYADLAEGTFVTGEVSFEDQGRSRVMLKNRGLMHVYADKASGRFLGAEWTGPRAENIA
HLLAWSYQQGLTTGQMLGMPFYHPVVEEGLRTALRDAEAKLQV
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaccaccatccagaccgacgtcgccgtgatcggcgcaggcaccgccggccttgccgcc
taccgtgccgcgattgccgcgggcaagcgcgccgtgatcatcgagggcggcccgtacggc
accacctgcgcgcgggtgggctgcatgccctccaagctgttgatcgctgccgccgaggcc
gcgcacgaactgcgccacaccgcgccgttcggcgtgcacgtggatgggcaggtccgcatc
gacggccgcgaggtgatggcccgcgtgcgcagcgagcgcgaccgctttgtcggctttgtg
gtgcgcggcgtggagagcatccccgaagccgaccgcatccgcggctatgcccgctttatc
gacaacaccacgctggaagtggatgggcacaccattgtgcgtgccagccgcgtggtcatc
gccaccggctccacgccgatgctgccggcgccgttccaggtgttcggcgaccgcctgatc
gtcaatgacgatgtgttcgcctgggaagacctgcccgccagcgtggtggtgttcggcccc
ggcgtgatcgggctggaactgggccaggccttgtcgcgcctcggcgtgcgggtgcgcgtg
ttcggcgtcagcggctcgctcggcccgctgacggatcccgtgatccgcgcctacgcggcg
aagaccttcaacggcgagttctatgtcgatccggacgccaaggtgaccgacatggcccgc
gacggcgaccaggtggtggtgacctacctggaccgcgaaggccgcagcgtgactgagcgc
ttcgactatgcgctggtcgccaccggccgcgtgcccaatgttcgcggcctgggcctggag
catgccggcctggcgctggatgcgcgcggcgtgccgctgttcgatgcgcgcacgctccag
tgcggcaatgcgccggtgttcatcgccggcgacgccaacaacatcctgccgctgctgcac
gaggccgccgacgagggcaaggccgcgggcgagaacgccgccagctacccgcaggtgaag
ccgctggcccgccgcgcgccgatcgcggtggtgttcacggacccgcagatcgcgatggtc
ggccagcgttacgccgacctggccgaaggcacgttcgtgaccggcgaggtcagcttcgag
gaccagggccgcagccgcgtgatgctgaagaaccgcggcctgatgcacgtctatgccgac
aaggcctcgggccgcttcctgggcgcggaatggaccggcccgcgtgccgagaacatcgcc
cacctgctggcgtggtcctaccagcagggcctgacgaccgggcagatgctgggcatgccg
ttctaccacccggtggtggaagagggcctgcgtacggcgctgcgtgatgcggaggcaaag
ctgcaggtctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (83)   

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