KEGG   Cryptococcus neoformans var. neoformans JEC21: CNA07620
Entry
CNA07620          CDS       T00243                                 
Name
(RefSeq) translation initiation factor, putative
  KO
K03257  translation initiation factor 4A
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CNA07620
   03012 Translation factors [BR:cne03012]
    CNA07620
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cne04147]
    CNA07620
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     CNA07620
   mRNA cycle factors
    Stress granule specific factors
     CNA07620
Translation factors [BR:cne03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    CNA07620
Exosome [BR:cne04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CNA07620
  Exosomal proteins of bladder cancer cells
   CNA07620
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 UvrD-helicase Flavi_DEAD tRNA-synt_1b AAA_22 fragilysinNterm
Other DBs
NCBI-GeneID: 3253907
NCBI-ProteinID: XP_567112
UniProt: P0CQ70
Position
1:join(2089220..2089227,2089457..2089534,2089588..2089768,2089834..2090299,2090356..2090645,2090707..2090840,2090895..2090943)
AA seq 401 aa
MSDTKGAAEQGLQIDGDLINSNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIM
PIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALG
DYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEAD
EMLSTGFKESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRILVKKDELTLEG
IRQFYINVEKEEWKLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGD
MKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGR
FGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgtctgacactaagggtgcggccgagcagggccttcaaatcgacggtgacctcatcaac
tccaactggaatgaggttgttgacaacttcgacgacatgaagttgaagggcgagctcctc
cgtggtatctacgcttacggttttgagcgaccttctgctatccagcagcgtgctatcatg
cccatcgttactggccgtgactgcattgcccaggctcagtccggtaccggtaagaccgct
accttctccgtttctatcctccagaggatcgacaccactgttaagaagacccaggctctt
gtccttgctcccacccgagagctcgctcaacagattcaaaaggtcgttatcgctctcggt
gactaccttaacgtcgactgccacgcctgtgtcggtggtaccgccgtccgagaggacatt
gccaggcttaacgagggtccccacatcgttgtcggtacccccggtcgtgtctttgacatg
atcaaccgaggtgctcttaagaccgaggccgttatgatgttctgccttgacgaggccgat
gagatgctttccaccggtttcaaggagtccatctacgagatcttccagcttctccccgga
gagacccaggtcgtcctcctttccgccaccatggcccctgaggtcctcgacgtcactaag
aagttcatgagggaccccatcaggattctcgttaagaaggacgagcttacccttgaaggt
atccgacagttctacattaacgtcgagaaggaggagtggaagctcgagaccctttgcgac
ttgtacgagaccgtcaccatcacccaggccgtcatcttctgctctacccgacgaaaggtc
gactggctcactcagcagctccacgaccgtcagttcaccgtctctgccatgcacggtgac
atgaagcaggaggagcgagaggtcatcatgaaggagttccgatccggttcttcccgagtt
cttatcaccaccgaccttttggcccgtggtatcgatgtccagcaggtttctttggtcatc
aactacgacctcccctcttctaaggagaactacatccaccgaattggtcgaggtggtcga
ttcggccgaaagggtgttgctattaacttcgtttccaacgaggacaagaacatgcttgag
gagattgagacttactacaacacccaggttgaggagatgcctcttaacgttgccgacctc
atctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (80)   

Download RDF
DBGET integrated database retrieval system