KEGG   Cryptococcus neoformans var. neoformans JEC21: CND03960
Entry
CND03960          CDS       T00243                                 
Name
(RefSeq) DNA repair-related protein, putative
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CND03960
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     CND03960
SSDB
Motif
Pfam: SMC_N AAA_15 AAA_23 AAA_29 AAA_21 Crescentin
Other DBs
NCBI-GeneID: 3257137
NCBI-ProteinID: XP_024512639
Position
4:complement(join(1094680..1094704,1094756..1095096,1095151..1095412,1095467..1095585,1095645..1095782,1095837..1095992,1096043..1096162,1096220..1096334,1096386..1096460,1096516..1096691,1096749..1096884,1096939..1097501,1097551..1097697,1097761..1097841,1097891..1098130,1098188..1098576,1098629..1098743,1098798..1098989,1099048..1099128))
AA seq 1156 aa
MARTGSRRQIDQLDSDNELARPHQSSQFKRAKTEPGTGDISSSDFNSDNDDAGMDMDDSS
DESEYEEPSYEEEALLAAYSDLRRSQKGYVGSASSAGIIKSISLIDFMCHRHLTVDFGPR
MNFVVGHNGSGKSAVLTAIAVALGGKANLTGRGTGLKDLIRTGAERAVITITLANSGDSA
YRPEVYNPNIVIERTIHSNGSSGYKFKASKDGKTIANKRSELTSISDYFNINIDSPLTVL
TQDQSRSFLQNADPSKLYKFFLNGTQLSNLLESYEASSQNIESLVNFIKRQREALPDLKA
KVESYKRKIQASKKVMRQKRRNKQLLIELAWSYVIEKEKARDEKKSDVLELREKIEKVQE
EIHKTDKELPQVNDAILETESDLKNLDESSKPLALAVRQAKARSQEASKELRSMQSSVAE
IEEKIISEKSTLERLERKIEEQLRLNEPEQQEERRRLLQRRAKAEDILSKLQLERPARER
ERDDKFQAQKRAKEELQSINANLRDVNQSKAQMQRQIQNISRQANSRIAAFGLHIEPLLE
EINSTNWKHSKPIGPMGMFVHLEDMRYADVLQVMLGSALCSFAVRDHEDRVKLSNILSKH
FARGYRPGNFTARDGARIPTIYRHSGELFDFSNGDLSRHGPTILSKLRIENEEVLRILID
HHNIEKTMLAPTLIEGNRLMDDLLNKNVAQYVTVHCADLMTTSGTKSNRHSGPTNKYRGN
PLFALDVGSEIAKCEAQLQDYESQCQQLCNSASMTENRIASLQQDMAKLSAGITDLQKKM
IPLEKDLDQTKRKLADMASTEIDTSESIRDDLKERINELEMKLQEHNADIIKQEDVIKQL
DADVVQKRAAFDAQAPTKELLLKNLESQVQRRTNILTRQSHWAQSLINYETKLEEAEEIL
VDLEQNVQEWTNKALDYAPEKINTIKTPAELEAERKALDQSITEASKALGVNLDELTAEY
RLQRQRYQKANENIKDLNFLRIVLRKAMTNRHTWWHQTRSHIAIRAKTAFVVFESFRAME
GRLNFDHGHEKLSLVIHNQTTTESQDGTYTQISHYKGAKALSGGERSFSTVSLLLALWST
VPCPIRALDEWDVFLDAANRKVAAKNLMEGARESDGKQYILITPLDMQGIDTSGPDKKVI
RMADPERGQGTLNMSR
NT seq 3471 nt   +upstreamnt  +downstreamnt
atggcgcgcacaggatcaagacgtcaaatagaccagcttgattccgataacgaattggca
cgtcctcaccagagttcgcagtttaaacgtgccaaaacggaacctggcacgggtgatatc
tcctcatcagatttcaactctgacaatgatgatgcgggtatggatatggatgattcaagt
gacgaatcggagtacgaagaacccagctatgaagaagaagctttactcgccgcttattcg
gatctgaggagaagccagaaaggttatgttggatctgcttcttcagctggtattatcaag
tccatatccctcattgatttcatgtgtcaccgacacttgactgttgatttcggaccgagg
atgaattttgttgtcggccacaacggaagtggtaaatccgcagttctgactgccattgca
gtagcccttggtggcaaggccaatctcaccggccgcggaactggtcttaaagatctgata
cgcacaggtgcagagcgtgctgtcatcaccattactttggccaactctggcgattctgct
tatcgtcccgaagtctacaatcctaacattgtcatcgaacgaactatacattccaatggt
tcctccggatataaatttaaggcgtcaaaagatggcaaaacaatcgcaaacaagagatct
gagctcacttctatctccgactatttcaacatcaacatcgactcgcctctcacagtctta
actcaagatcaatctcgaagtttcctacagaatgcagacccctccaaactgtacaaattt
tttttgaacggtactcagctttcgaatctgcttgaatcatatgaagcgtcttcccagaac
attgagtcacttgttaacttcattaagcgacaacgagaagctcttccagacctgaaggcc
aaagttgagagctacaaacgaaagattcaagcgtccaaaaaggtcatgaggcaaaaaaga
aggaacaaacaactcttaatcgagctagcatggtcttatgttatcgagaaagaaaaagct
cgagacgagaaaaaatcagacgtcctcgaattacgggaaaagatagaaaaggtccaagaa
gagatccacaaaactgataaagagttgccccaagtaaatgatgcgatcttggagacagaa
agtgatctcaagaatcttgatgaatcttcgaaaccacttgctttggctgtcaggcaagcc
aaagccaggtctcaagaggctagcaaagagctcagatcaatgcagagctccgttgcggag
attgaggaaaagattatctcagaaaaaagtacgcttgagcgactcgaaagaaaaattgag
gaacaactccgcctcaatgagccggaacagcaggaggagcgcagacgccttctccaacgt
cgggctaaagctgaggatatattgagcaaactacagcttgagcgacctgcccgtgaaaga
gaacgtgacgacaagtttcaagctcaaaaacgagctaaagaggaactgcagtcgatcaac
gccaatttaagggatgtaaatcagtcaaaagctcaaatgcaacgccagatacaaaatatc
agtagacaagccaatagtagaatagccgcttttggtcttcacatcgaacctctgctcgag
gaaatcaacagcacaaactggaagcactctaaaccgataggccccatgggtatgtttgtt
catcttgaagatatgcgttacgcggatgttcttcaagtaatgctcggatctgcactttgc
tcgtttgctgtccgggaccatgaagaccgcgtcaagctgagcaacatactgagcaagcat
ttcgcgcgaggatatcgtccgggcaactttaccgcaagggatggagctcgcattcctact
atctatcggcattctggcgaattgtttgacttttccaacggcgacctgagcagacatggc
cccactatattgagcaagttgcgcatcgaaaatgaagaagtgcttcgcattctaatcgat
catcataacatcgagaagactatgcttgcacctactcttattgaaggcaacagattgatg
gacgatctcttgaacaaaaacgttgctcagtatgtgacagtccactgcgcggatctaatg
acaacctctggtactaaatcaaatcgacactccggacctactaacaaatatcgaggcaat
cctctttttgccctggatgtgggaagtgagattgcgaaatgcgaagcccaacttcaagac
tacgaatcgcaatgtcaacaactgtgcaactccgcttctatgaccgaaaatcgcattgct
tctctacagcaagacatggccaagctttctgctggtatcaccgatttgcagaagaaaatg
atccctttagaaaaagatcttgatcagaccaaaagaaagctggcagatatggcttcaact
gaaatcgatactagcgaatccatccgtgacgacttgaaagaaagaattaatgaacttgaa
atgaagctgcaggagcataatgcggacatcatcaagcaggaagatgtcatcaaacagcta
gatgcggacgtcgtccaaaagcgagcagcttttgatgcccaggctccgacaaaagaattg
cttctgaaaaatttagagagccaagtacagcgcagaacgaatattctgactcggcagagt
cactgggcccaatcattgatcaattacgagaccaagcttgaggaggcagaggaaattttg
gtggatctagagcaaaatgtccaggaatggaccaataaagcactggactatgctcctgaa
aaaatcaacaccatcaaaacgccagcggaactggaagctgagcgaaaggccttggatcag
tccatcaccgaagcttccaaagccctcggcgtcaatttggatgagctgaccgccgaatat
cgtctccaaaggcaacgatatcagaaagcgaatgaaaacatcaaagatctgaatttcctc
cgaattgttcttaggaaggccatgaccaacagacacacttggtggcatcaaacccgcagc
catattgctatccgggccaaaacggctttcgtcgtgtttgagagttttagggcaatggaa
ggaaggctgaacttcgaccatgggcatgagaagctgtcgttggttatccataaccagacg
accacggagtcccaggacggcacttatacacagatatcgcattataaaggtgccaaagcg
ctttccggcggagagcgttccttttctacggtgtctctccttttggccttatggtctact
gttccttgtcctatccgagctcttgacgaatgggatgtatttctagatgcagcgaaccga
aaggtggctgcaaagaacctaatggagggtgccagagagagtgatgggaaacagtatatc
ttaattaccccgttggatatgcagggtattgacaccagtggacccgacaagaaagttatc
aggatggcagatcctgagagagggcagggaacactcaatatgagtcgatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (71)   

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