KEGG   Cryptococcus neoformans var. neoformans JEC21: CNF02870
Entry
CNF02870          CDS       T00243                                 
Name
(RefSeq) expressed protein
  KO
K15147  mediator of RNA polymerase II transcription subunit 5
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNF02870
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Middle
     CNF02870
SSDB
Motif
Pfam: Med5
Other DBs
NCBI-GeneID: 3258206
NCBI-ProteinID: XP_024513123
Position
6:join(817172..817240,817291..817357,817409..818373,818440..818591,818646..818775,818840..818941,818989..819339,819393..819616,819673..819881,819932..820575)
AA seq 970 aa
MLSSPSIPQLIATAYAQALPPSRLLKTLQEVHLHNLSPSVQYDLIRAFLDHLLPVPPSIM
LAYLAHALSTSVITTQDFTIGLLFYMSGHEIPPIESLVSIVNVLMENPTCFEDGTILPSM
LSDPALVQSDTNGELSKYRDNNQTSTLSLLLPLLRVSATPFPPPTLTAFIARLLNCLSPF
PVPPLDVGLEAGQLLPSLTDEISIPLRNCLGGLMADATTNDPQQVEQVVFQQDSQLAQGD
SPSQVEMPTNSSLPLKATVAFLLEQAHRASQWDPSELALEMEHYQTPAPSYVRMLKAGQH
ICSNPEEFIVVLFEVSIERLISEDGRSLIAKAEGIRDWGWVTESLPNLLRWWRSQREEDG
FVGWQLPSVVAEPLTKAVQVFLPAMQSYSEKVLETYEVMVQSAEIEEESSGFTPPESWQL
VSLQEYLIGKLIEMELITRTEACKMIPTISVPQTVQGQSLLERMESESRAHVKPLVFIIT
YAFGAAKSFAYEIVNIIKSSPQVPPPENLFLHVSYQPSIFSALVTFISPLSLYTLMSDRL
LEAYSELDEFARSDDPQGYLTRFGEGVILLESFAREFNLDLPELLANGRRATGYGLLDAE
QKDCLNGWVKAIFGSDGIEDQILLATPPQTLCCLVPTLIQQAIAAVACNQIDLDTLHSGL
SYFSQPLLSWCLGGVIEWLCDEILRQGALSALHLVVLQALAMGHACPEQLLKVNDRALRK
LFNPLSGLDEVIGTSNFDMFAFKAKLESLGITTSHHYGPLNQPSVKSSIQSISSLPFATA
FWANPLLDSLWASAGTSNWMTVVLKNIFSQLDTFPVSPVGSACQRSGVYANFVPFLLMVD
IKGNEPLLSGLAAWLRNSTEDLIHYTRGSRVLAGIFTQCILLADLIWGRVMAKRVIKELV
VELHSVTTLGVRSGGQSEETTQLHSRKMKHRDGRRLTSEQRSMCEDIVKMLTYDDGLRAR
WGNHWVDLAV
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgctctcctctccctcgatccctcagcttatagccacagcttatgcccaagcattgcct
ccttctcgcttactcaagactcttcaagaagtccatcttcataatcttagccccagcgtc
cagtatgatctcatacgtgcatttcttgaccatcttcttcccgttcctccgtccatcatg
cttgcctatcttgcccatgcactatcgacatccgtaataacgacacaggatttcacaatt
ggattgcttttctatatgtctggtcacgaaattccccctatagagtctcttgtttccatc
gtcaatgtcttgatggaaaatcccacttgttttgaagatggtaccatcttgccctctatg
ctttctgatccagctttggtacaaagcgacaccaacggtgaattatcaaaataccgtgac
aacaatcagacaagtacgctgtcccttcttctccctttactgcgtgtatcagctacgcca
ttccccccaccaacactcacggctttcattgcccgattattaaactgcctctcgcccttt
ccggtaccgccactcgatgtaggtctggaagcaggtcagttacttccttccctcacagac
gaaattagcatcccactccgaaactgcctgggagggctgatggccgatgcgaccacaaat
gacccgcaacaagttgaacaagtcgtatttcaacaggactcacaacttgcacaaggcgat
agcccttcccaagttgaaatgccaacaaattcctcacttccacttaaagctactgttgcg
ttcttattagaacaggctcatcgtgcatcccaatgggatccctctgagcttgccctcgaa
atggaacattatcaaacacctgcaccaagttatgtacgcatgctcaaagcaggccagcat
atctgttccaaccctgaagaattcattgtcgtcttattcgaagtatcgattgaaaggcta
atttccgaagacggccgaagcctcatagccaaggctgaaggaatacgagactggggttgg
gtaactgaatccttacctaatctcctaagatggtggcgatcccagagggaagaggatggc
ttcgtaggttggcaactgccgtctgtggtcgctgaacctttgaccaaagctgtacaagtg
tttcttccggccatgcaaagctattctgaaaaggtgttagagacgtacgaagtaatggtg
caatctgcggagatcgaggaggaatccagtggatttactccccctgagtcttggcaatta
gtgtcattgcaagagtatctcattgggaagttgattgagatggagctcatcactagaacc
gaagcctgtaagatgatcccgacgatatcagtaccacaaactgttcagggtcaatcttta
ttggaaaggatggaatcggaatctcgtgcccatgtcaaacctctcgtgttcatcataact
tacgctttcggcgccgcaaagtctttcgcatatgaaattgtcaatatcatcaaatcatcg
cctcaggtgcccccgcctgaaaatcttttccttcatgtatcgtatcagccctcaatattt
tcggccctggtcacgttcatatcacctttgtcgctgtatacgctaatgtcagatcggcta
ctggaagcttattctgaattggacgaattcgcccgatctgacgacccacagggctacctt
acgagatttggagagggggtcatcttgctcgaaagctttgctagagaattcaatttggat
cttccagaattgctcgcgaacgggagaagggcgactggatatggcttgttggacgcagag
cagaaggactgcttgaacggttgggtaaaggcaatcttcggctccgatggaatagaagat
caaatacttttggccacccccccgcaaacactttgctgcttagtacctactttgattcaa
caagctatcgcggcggtagcctgcaatcaaatagatcttgataccttacatagcgggctt
tcgtatttctctcaaccgttattaagctggtgcttgggtggagtgatcgaatggctctgt
gacgagattctaaggcagggagccctgagtgcgctccatctcgttgttcttcaagcacta
gcaatgggccatgcttgcccagaacagcttctgaaagtgaatgacagagctctcagaaaa
ctatttaatcctctaagtggtctagatgaggttataggaacctcaaattttgatatgttt
gcattcaaggctaagctagagtctctggggatcaccacctctcatcactatggaccgctg
aatcagccgtcagttaagtcaagtatccaaagcatcagcagtcttccatttgcaacagca
ttttgggcgaatcctctgcttgattccctatgggcttctgcaggcacttcaaactggatg
acagttgtcctcaagaatatcttctctcaactcgatacatttccagtttctccagtaggc
tctgcttgccaaagatccggagtatatgcgaactttgttccgttccttttgatggtcgat
atcaagggaaacgagccactgttaagcgggctagccgcgtggcttagaaattccactgaa
gacctcatccattacacccgcggcagtcgcgtactcgccggtatttttacgcagtgtata
ttgctagccgacctcatatggggcagagtgatggccaagcgagtgatcaaggaacttgta
gtcgagttgcattcagttacgacactgggtgtcagatcaggcgggcaaagcgaggaaacg
actcaactccacagtcgcaaaatgaaacatcgtgatggacgccgcctgacttctgaacaa
aggtcgatgtgtgaggatatagtcaaaatgttgacctatgacgatggattgagggctagg
tgggggaatcattgggtagatttagccgtataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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