KEGG   Cryptococcus neoformans var. neoformans JEC21: CNF03310
Entry
CNF03310          CDS       T00243                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K12842  U2-associated protein SR140
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNF03310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cne03041]
    CNF03310
Spliceosome [BR:cne03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CNF03310
 Complex B
    CNF03310
SSDB
Motif
Pfam: Surp RRM_1 CID RRM_7 CTK3 FMN_dh
Other DBs
NCBI-GeneID: 3258186
NCBI-ProteinID: XP_571608
UniProt: Q5KF27
Position
6:join(982212..982280,982345..982460,982517..982721,982770..982873,982938..983011,983083..983117,983174..983191,983248..983335,983398..983580,983652..983953,984008..984549,984617..985007)
AA seq 708 aa
MSRRLDLSKFAGSDSEGEEDVPKHQLELTALKSKTFSQGITKKTKRDLEKEAEERKRIEE
EKAAALVMAEIEREFEGSAEGSSSGHTGMRGFRGRPIGPGGGFVRAGGAPMGAPTSFAPP
RGPAAMGYGRPKPMPVRAPSPPPPPSGPKPRGKRAMDSFLEEIKHNQNAREQKFSQIAKK
EGSSVTALAAWETGGSGFDHESTNLFISNLPQEITEEILGLHFAKQGPVATVKIMWPRGD
EAFSQASARRGLTGFVSYMERKDAERAVKELDGSEWMGNSIRVGWSKPVAKPLKALFDIT
SDSHKRRRSRSRSRGRSPPRKKSHRARSYSYSSSSSYSRSPSPERTCKQKWLDSIPEEHG
RFIKTVANRVKEHGKGFEDVLMEKERENPKFAFLYDDKLPDYHLYQSTLSSHYRIPSPPP
EAFNDDGYASIYSSDSAEDSERERTSKGKLGRLAKRRFEAMLRVMTGKRAEIARGMEFAL
RRAEAADEIADIICQSVQVDSTPVPRKIARLHLISDILHNSASPLPNVWRYRLAFEHRLP
PVLAHLNTVEKSLMVYSGKISADVFRGQVGNVLDIWERWIVFNTDTAELFRAVLVGDKPL
SALVKTPQGAWVDKAKLEAEEAERKKRENEQQKAEEEEDRFEQSGFKSSFKRINPQAGPA
PAPESVPSAVRSAFEDEDLDGEVMEDLDGEAMEDLDGEAMEDLDGEAM
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgtcccgcaggctagacctctccaaattcgcaggctcagactcggaaggcgaagaagat
gtccccaaacatcaactggaattgactgcactcaagagcaagaccttttctcaaggtatc
accaaaaaaacaaagcgtgatctggaaaaggaggcagaggaacgtaagcggattgaagag
gaaaaagcggcagcactggtaatggcagagattgaaagagagtttgaaggatcagctgag
ggaagctcgtccggtcacacgggtatgaggggttttcggggaagacccattgggcctggg
ggagggtttgtaagggccggaggcgcgccgatgggagcgccaacgtcttttgcgccccct
agaggtccagccgctatgggctacggtagaccaaaacccatgcctgtcagagcgccatca
ccgcctcctccacccagtggaccgaagccaaggggcaagagagcgatggattcattcttg
gaagaaatcaagcataaccagaacgcccgcgaacaaaaattcagtcagatcgcaaagaag
gagggatcttcagtaactgcccttgcagcttgggaaactggcggaagtggcttcgaccat
gagagcaccaatttattcatttcaaatttgcctcaagagatcacggaagagattctcggt
ttgcactttgcaaagcagggaccggtggcgactgtcaaaatcatgtggccccgaggcgac
gaagcattcagccaggcaagcgcccgacggggtctcaccggtttcgtgtcgtacatggaa
cggaaagatgctgaacgggctgtgaaagagctggacgggtcggaatggatgggaaattcg
attcgagtaggatggagcaagcctgttgcaaagcccttgaaagctcttttcgatatcaca
agtgacagtcacaagcgaagaaggtcaagatcacgatcaaggggccgcagccctcctaga
aagaaatcgcatcgcgcccgttcatactcgtactcctcgtcatcttcttactctcgttcc
ccttcgcccgaacggacttgcaaacaaaagtggctggatagtatccctgaagaacatggg
aggtttatcaagactgttgcgaaccgcgtaaaggaacatggtaaaggatttgaagatgtt
ttgatggaaaaggaaagggagaacccaaagtttgcctttttgtatgacgacaagcttccc
gactaccacctttaccaatccacactttcatcacattaccgcattccgtctccacccccc
gaagcattcaacgacgacggttacgcctccatctactcttccgactcggccgaggattcc
gaaagggagcgaacgtccaagggtaaacttggccgacttgcgaaaaggcggtttgaggcc
atgttacgggtgatgactgggaaaagggcggagattgcgcgggggatggagtttgcgctc
cgacgagccgaagcggcggatgagattgcagatatcatctgtcagtctgtccaggtggat
tcgacgcccgtcccgcgaaagattgcgcgtcttcacctcatctctgatatccttcacaac
tctgcgtcgcctttgcccaacgtttggcgataccgcctcgcgtttgagcataggctaccg
cccgtgctggcgcatttgaatacggtggagaagagtttgatggtgtattcgggcaagatt
agtgcggatgtgtttagagggcaagtggggaatgtattggatatctgggaacgatggatt
gtattcaacaccgatactgcggaactcttccgtgccgtgttggtcggcgacaagcctctc
tctgcgctcgtcaagaccccccagggcgcatgggttgacaaggccaagttggaggcggag
gaagcggagaggaagaagagggaaaacgagcaacaaaaagctgaagaggaggaagatagg
tttgagcagagtgggtttaagagtagttttaagaggatcaatccgcaggctgggcctgcg
cctgcgcctgaatcagtaccgtcagctgtcagatctgcgtttgaggatgaagatttggat
ggggaggtgatggaagatttagacggggaggcgatggaagatttggacggggaggcgatg
gaggatttggacggggaggcaatgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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