KEGG   Cedecea neteri SSMD04: JT31_16395
Entry
JT31_16395        CDS       T03298                                 
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
cnt  Cedecea neteri SSMD04
Pathway
cnt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cnt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    JT31_16395 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnt03400]
    JT31_16395 (recB)
Enzymes [BR:cnt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     JT31_16395 (recB)
DNA repair and recombination proteins [BR:cnt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JT31_16395 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_22 AAA_11 AAA_25
Other DBs
NCBI-ProteinID: AIR06138
UniProt: A0A089Q1H0
Position
3472380..3475925
AA seq 1181 aa
MTDVTAQPLDPLSLPLFGERLIEASAGTGKTFTIAALYLRLLLGLGEENAFPRPLGVEEL
LVVTFTEAATEELRGRIRANIHELRIACIRNRSKNPLIQSLLAQIADKQLAARTLLLAEQ
QMDEAAIFTIHGFCQRMLSLNAFESGMLFEQQLLEDESVLRRHACADFWRRHCYPLPKPV
AQAMSEAWSGPEALLRDINSWLQGEQPQLKQPPADDETLLARHEKIIAAIDGVKAQWRAA
AGELASLIGDSGVDKRSYSSKHLPNWLEIVGQWAQLETTSYQLPDALAKFAQSTLEEKTR
KGEVPRHSLFNAIDALLAEPLTLRDLVIARAMAEIRYIVQQEKRRRGELGFDDMLSRLDE
SLHQPGGDALAAAIRGRFPVAMIDEFQDTDPQQYRIFRRLYIRQQDTALLLIGDPKQAIY
AFRGADIFTYMKARHEVSAHYSLDTNWRSAPAMIHGVNTLFQQVENPFLFRQIPFLPVKS
APRNGGLRFTVHGESQAAVKMWLQPGEGVGVSDYQQAMATQCARQIRDWLTAGQRGDALL
WRGDDSRPLRASDMTILVRSRGEAAIVRDALGALNIPSVYLSNRDSVFATVEARELLWLL
QAVLTPEIETAMRSTIATGMLGLDALTIEALNKDELAWDNLVEEFFGYREQWLKRGVMPM
LRALIGARNIAENLLATPGGERRLTDILHISELLQEASAEMESEHALVRWLAQRIAEPDS
NASSQQLRLESDKHLVQVVTIHKSKGLEYPLVWLPFVANYRPQSSGLYHDRTTFTSLLDL
SNDAESLGLAEEERLAEDLRLLYVALTRSVWHCSLGVAPLFRGSRAKKGNSDLHLSALGY
LLQKGEALDAEGLRQALDVLKSEAIDVETLPPGEDSPWQLVSSALPELAARQLKRRIADN
WRVTSYSGLQQHGSSRVLDLVPRLDVDAVGEAPEQSEPSLTPHTFPRGASPGTFLHSLFE
EVDFTQPVDSEKTAQQLLANGFGSEWCPVVSRWLEEVLAAPLNDTGVALNLLPSKEKQVE
LEFYLPIDHELQAPALDALIRRYDSLSAGCPPLDFRQVKGMLKGFIDLVFRWEGRYYLLD
YKSNWLGEDSSAYTRQAMAQAMQSHRYDLQYQLYTLALHRYLRHRMAGYDYQQHFGGVIY
LFLRGVEQGKPEQGIFSTRPDIKLIDAMDALFAGTAEEMGQ
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgaccgatgtaaccgcgcagccccttgatcctttaagtttgccgctgtttggtgaacgg
ttgatagaagcctccgcgggtaccggtaaaacctttaccatcgccgcgctttacctgcgg
ctgctgctggggttgggggaagagaatgctttccctcgcccgctcggcgtagaagaactg
ctggtggtgacctttaccgaagcggccacggaagaactgcgtggccgtattcgggccaat
atccacgaattgcgtatcgcctgcatacgtaatcgaagcaaaaacccactaattcagagc
ctgcttgcccagattgcggacaagcagcttgctgcccgtaccctgctgttagccgagcag
caaatggatgaggccgctattttcaccatccacggcttttgccagcggatgctcagcctg
aatgcttttgagtccggcatgctgtttgaacagcagcttctcgaagatgagtccgtgctg
cgccgccacgcctgcgcagacttctggcgccgtcactgttatccgctgccaaaaccggtg
gctcaggcaatgagtgaagcgtggtcggggccggaagcgctcctgcgggacatcaacagc
tggctccagggcgagcagccgcagctcaaacagccgccggccgatgacgaaacgctgctg
gcccgccatgaaaagataatcgccgctatcgacggggtaaaagcccagtggcgagctgcc
gcaggtgagctggcgagcctgattggcgattctggcgtggataagcgcagctacagcagc
aaacatttaccgaactggctggagattgtgggccagtgggcacagctggaaacgaccagc
tatcagctccctgacgcgctggctaagtttgcacaaagcacgctggaagaaaaaaccagg
aaaggtgaagtgccccggcacagcctgttcaatgcaatagacgccctgctggccgagccg
ctgaccctgcgcgacctggtgatagccagggcgatggccgaaattcgctacatcgtgcag
caggaaaaacgccgccgcggtgagctgggctttgacgatatgctgagccggctcgatgag
tctttgcatcagcccggtggcgatgctttagctgcggctatccgtgggcgttttccggtg
gcgatgatcgatgaattccaggataccgacccgcagcagtaccgcatcttccgccggctg
tatatcaggcagcaggacaccgcactgttgctgattggcgacccgaagcaggcgatttat
gctttccgcggcgctgatatttttacctacatgaaagcacgccatgaggtgagcgcccac
tactcgttggacaccaactggcgctcggctccggcgatgatccacggcgtgaacacgctg
ttccagcaggtcgagaatccgttcttattccgtcagatcccgttcctgcccgtcaagtca
gcgccgcgcaacggcggcctgcggtttaccgtccatggtgaaagccaggctgcggtaaaa
atgtggctccagccgggcgaaggtgtcggtgtaagtgattaccaacaagcgatggccacg
cagtgcgcccggcaaattcgcgactggctaaccgccgggcagcggggcgacgcgctgctt
tggcgaggggatgactcccgcccgctcagggcatcggatatgacgattctggtgcgcagc
cgtggcgaggcggccatcgtgcgcgatgctcttggcgcgctcaatattccttcggtgtac
ctctcaaaccgtgattcggtgtttgcaaccgtagaggcacgcgagctgctgtggctgctg
caggcggtattaacgcctgaaattgaaaccgccatgcgcagcaccattgcgacgggcatg
ttggggctggatgcgctgactattgaggcgctgaacaaagacgagctagcctgggacaac
ctggttgaagagtttttcggctaccgcgaacagtggctgaagcgcggcgtgatgccgatg
ctaagagcactgatcggcgcgagaaatattgctgaaaacctgctggccacgccgggcgga
gagcgccggctgacggatatcctgcacatcagcgagcttctgcaggaagcctcggcagaa
atggaaagcgagcacgcgctggtgcgctggctggcgcaacgtattgccgagccggacagc
aatgcctccagccagcagctgcgtctggaaagcgataaacatctggtgcaggtggtgacc
atccacaaatccaaagggctggagtacccgctggtctggctgccgttcgtggccaactat
cgcccgcagagcagcggcctgtatcacgatcgaaccacttttacctcgctgctggattta
agcaatgatgcggaaagccttgggcttgccgaagaagagcgcctggccgaggatctccgg
ttgctgtatgtggcgctgacccgctccgtctggcactgcagcctgggcgtggcgccgctg
ttccgtggttcccgggcaaaaaaaggcaacagcgacttgcacctcagcgcgctgggctat
ttgctgcaaaaaggcgaagcgcttgatgccgaagggcttcgtcaggcgctggacgtcctc
aagagcgaagccattgacgttgaaacgctgcctccgggtgaggattctccgtggcagctg
gtctccagcgcgttgcctgaacttgccgctcgccagcttaaacggcgaattgccgataac
tggcgcgtgaccagctactccgggctgcagcagcacggcagcagccgggtgctggatttg
gtgccacgtcttgacgtggatgccgtgggggaagcgccggagcaaagtgagccgtcactt
acgccgcatacattcccgcgcggggcttcaccaggcactttcctgcacagcctgtttgaa
gaggttgattttacccagccggtagatagcgagaaaacggcacagcagctgcttgccaac
ggatttggcagcgaatggtgcccggtggttagccgctggctggaagaggtgctcgccgcg
ccgctcaatgacaccggggttgcgctgaatctgcttccgtcgaaggaaaaacaggttgag
ctggagttttatttaccgatcgaccatgagctgcaggctcctgcgctggacgcgttgatt
cgccgttacgattcgctttccgccggttgtccgcctttggacttccgccaggtgaagggg
atgctgaaggggtttatcgacctggtattccgctgggaagggcgttattacctgctggac
tacaaatctaactggctgggcgaagacagcagcgcctacacccggcaagccatggctcag
gcgatgcagtcccaccgctatgacctgcagtaccagctctatacgctggcgctgcaccga
tacctgcgtcatcgcatggcaggttatgactaccagcagcacttcggcggggtaatttat
ctgttcctgcgcggcgtggagcagggcaaacctgagcagggtattttttctacgcgcccg
gacatcaagctgattgatgcgatggacgcgctctttgccgggacagcagaggagatgggc
cagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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