KEGG   Cedecea neteri SSMD04: JT31_16730
Entry
JT31_16730        CDS       T03298                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
cnt  Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:cnt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnt03021]
    JT31_16730
Transcription machinery [BR:cnt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JT31_16730
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AIR06200
UniProt: A0A089RI91
Position
3542123..3543115
AA seq 330 aa
MSQNTLKVNELNEDAEYDENGVEAFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNLEALFRE
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagtcagaatacgctgaaagttaacgagttaaacgaagacgcggaatatgatgagaac
ggagttgaggcttttgacgaaaaagcccttgtagaagaggaacccagtgataacgacctt
gcagaagaagagctgttgtcacagggtgctacacagcgtgtactggatgcgactcagctt
tatcttggagagatcggttactctccattattaacagccgaagaagaagtttactttgct
cgccgcgcactgcgcggtgatgtagcctcccgccgacgcatgatcgaaagtaacctgcgt
ctggtggtcaagattgcccgtcgttacagcaatcgcggtctggctttgctggacctgatt
gaagagggtaacctggggcttattcgtgccgttgagaagttcgatccagaacgtggattc
cgtttctcaacgtacgccacatggtggattcgtcagaccatcgaacgggcaatcatgaac
caaacccgtacgattcgcctgccgattcacattgtgaaagagctgaacgtttacctgcgt
accgctcgcgaactctcccataagctcgaccacgagccgagtgcggaagagattgccgag
cagctggataaaccggttgatgacgttagccgtatgctgcgtctcaacgagcgcattacc
tcggtagacaccccattgggcggtgactctgagaaagcgctgctggatatcctcgcggac
gagaaagacaacggaccggaagacaccacgcaagacgatgatatgaaacagagcatcgtg
aagtggttgttcgaactgaacgctaagcagcgtgaagtgctggctcgtcgttttggtctg
ctgggttatgaagctgcaacgctggaagatgtgggtcgtgaaatcggcctgactcgtgaa
cgcgttcgtcagattcaggttgaaggcctgcgccgtctgcgtgaaatcctgcagactcag
gggctgaacctcgaagcgctgttccgcgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system