KEGG   Colwellia sp. Arc7-D: DBO93_00335
Entry
DBO93_00335       CDS       T05422                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cola  Colwellia sp. Arc7-D
Pathway
cola03030  DNA replication
cola03410  Base excision repair
cola03420  Nucleotide excision repair
cola03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DBO93_00335
   03410 Base excision repair
    DBO93_00335
   03420 Nucleotide excision repair
    DBO93_00335
   03440 Homologous recombination
    DBO93_00335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cola03032]
    DBO93_00335
   03400 DNA repair and recombination proteins [BR:cola03400]
    DBO93_00335
Enzymes [BR:cola01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DBO93_00335
DNA replication proteins [BR:cola03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DBO93_00335
DNA repair and recombination proteins [BR:cola03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DBO93_00335
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DBO93_00335
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AWB59393
UniProt: A0A2S0V5B4
Position
80552..83296
AA seq 914 aa
MPTSDQSPLILVDGSSYLFRAYHVPYLQALSTSDGQPTGAITGVLNMFRSLKKDYPNGNV
IAIFDAKGKTFRNDMYPEYKANRPPMPDDLRTQIAPIHDIITAMGLPLLVVDGVEADDVI
GTLSHQATALGIETVISTGDKDMAQLVNPHVRLINTMTNVEMDEAGVTEKFGVRPDQIID
YLALMGDKVDNIPGVEKCGPKTAVKWLTAYPSLKEVMEHADEVKGKVGENLRTALEFLPL
SYELATIKLDVVLEQNVAELKPSAPDTETLRTLYKKYELKRLLADLDGSDSKVESDTTAA
STVVADLPAAVDSEYDIILDKASFTTWLEKLKTAELFAFDTETTSVDYMKAKLVGLSICI
EVGKAAYVPLTHDYIDAPEQLPLDWVLEQLKPLLESETVFKVGQNLKYDANVLSHYNITM
QGIQFDTMLESYCFNSVATRHNMDALADKYLGYQTVHFEDIAGKGAKQLTFNQIDIDKAG
HYAAEDADITMRLHEAIYPQLANIKSQLSVFTDIEMPLLPVLARMEQHGVLIDCDMLAEQ
SQSIGVRLAELEIEAHNLAGKSFNLSSPKQLQVILFDELKIPVIKKTPKGAPSTAEEVLQ
ELALDYPLPKVILENRGLSKLKSTYTDKLPLLVGAKTNRVHTSYHQAVTATGRLSSTDPN
LQNIPIRSEEGRKIRLAFIAPPEHKIVAIDYSQIELRIMAHLSDDPGLVKAFSEGKDVHK
ATAAEIFAVPLDEVTSDQRRSAKAVNFGLIYGMSAFGLAKQLNVPRHTAQAYMDKYFERY
PNVSQYMEDTRQKATENGYVETLFGRRLYLPDINAKNGMRKKAAERAAINAPMQGTAADI
IKKAMLDVDAWIEEKNDPRIKMTMQVHDELIFEIHQDIVEATTATLVEIMNNAITMSVPL
IAEAGMGDNWEQAH
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgccaacttctgaccaatcaccgcttattttagtcgatggttcatcttatttatttcgc
gcatatcacgtgccatatttgcaagctttatcaacatcagatgggcaacctacaggagcc
attacgggtgtcttgaatatgttcagaagtttgaaaaaagattatcccaacggtaatgtt
attgcgatatttgacgcgaaaggtaaaacgtttcgtaatgacatgtatccagaatacaaa
gctaatcgtccgccaatgccagatgaccttcgcacgcaaattgcgccaatacatgacatc
attaccgctatgggtttgccactattagttgtcgatggcgttgaagctgacgatgttatt
ggtacgctgtctcatcaagcaacggccttaggtattgaaacggtaatttctaccggtgat
aaagatatggcgcaattagtaaacccacatgtgcgcttaataaataccatgactaatgta
gaaatggatgaagccggcgttactgaaaaatttggtgttcgtcctgatcaaattatcgac
taccttgccttaatgggcgataaagttgacaacattcctggtgttgaaaaatgtggtcct
aaaactgccgtaaaatggttaactgcatacccgagcttaaaagaagtgatggaacatgcg
gatgaagtaaaaggcaaagtgggtgagaatttacgtaccgcgttggagtttttaccatta
tcttatgagcttgccaccatcaaacttgacgtcgtacttgagcaaaacgttgctgaactc
aaaccaagcgcaccagataccgaaacattaagaacattatataagaaatacgaacttaag
cgtttgttagctgacttagatggtagtgatagcaaagtagaatcagacactactgcagcg
agcactgtagttgctgatttaccagccgccgttgatagcgaatatgacattattctagat
aaagctagctttacgacttggcttgaaaagttaaaaaccgctgagctatttgcttttgac
actgagaccaccagcgttgattacatgaaagctaaactggtaggtttatcaatctgtatc
gaagtaggtaaagcagcatatgtacctttaacgcatgactatattgatgcgccagagcag
ttaccgctagattgggtgttagaacagcttaagcctttattagaaagtgaaaccgtattt
aaagtcgggcaaaatttaaaatacgatgccaatgtattgtcacattacaacattacaatg
caaggtattcaatttgataccatgctcgagtcatattgttttaatagtgtagcaacacga
cataacatggacgctttagcggataagtatttaggttatcaaactgttcattttgaagat
atagcaggcaagggcgctaaacagctgacctttaatcaaattgatattgataaagctggg
cattatgccgctgaagatgccgatattactatgcgtttgcacgaagctatttatccacaa
ttagcaaacataaaatcacaattatccgtttttaccgatattgaaatgccactattaccg
gtacttgctcgcatggagcagcatggcgtgttaattgattgcgatatgctagcagagcaa
agccaatctataggtgtgcgtttagctgagttagaaatagaagcacataacttggctggt
aaaagttttaacttaagttctcctaagcagctacaagttattttatttgatgagcttaaa
attccagttattaagaaaacacctaaaggcgcaccttcaaccgcagaagaagtgctacaa
gaattagcattagattacccattacctaaagtgattttagaaaacagagggttaagtaaa
ttaaagtctacttatactgataaattaccgttattggtaggcgctaaaaccaatcgtgtt
catacttcttatcatcaagcggttactgcgactgggcgattatcttcaactgatccaaac
ctacaaaacattccaattagaagtgaagaaggtcgcaaaattcgtctagcttttattgct
ccgcctgagcataaaattgtcgctatcgattactcgcaaatcgagttacgcataatggcg
cacttatctgatgatccgggtttagttaaagcgttttcagaaggtaaagacgtacataaa
gcgacagcagcggagatatttgctgtgccactagatgaagtgactagtgatcaacgtcga
agcgcgaaagcggttaactttggtttgatttatggcatgtcagcatttggtttagcaaaa
caattaaacgttcctcgccatactgcgcaagcttatatggacaaatactttgagcgttat
cccaatgtttctcaatatatggaagatacccgtcaaaaagcgacagaaaatggctatgta
gaaaccttatttggtcgccgactttatttacctgatattaatgcaaaaaatggtatgcgt
aaaaaagcagctgaacgtgccgctattaatgcgccaatgcagggaactgctgctgatatt
attaaaaaagcgatgttagatgttgatgcttggatagaagagaaaaacgacccgagaatt
aaaatgaccatgcaagtgcatgatgaattaatttttgagattcaccaagacattgttgaa
gcaacaaccgctactttagtggaaataatgaataacgctatcaccatgagtgtcccgtta
atcgcagaagcgggtatgggcgataactgggagcaagcacattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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