KEGG   Colwellia sp. Arc7-D: DBO93_08925
Entry
DBO93_08925       CDS       T05422                                 
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
cola  Colwellia sp. Arc7-D
Pathway
cola00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cola00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DBO93_08925
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cola01007]
    DBO93_08925
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cola03016]
    DBO93_08925
Enzymes [BR:cola01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     DBO93_08925
Amino acid related enzymes [BR:cola01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   DBO93_08925
Transfer RNA biogenesis [BR:cola03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    DBO93_08925
 Prokaryotic type
    DBO93_08925
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N DUF4110 Phage_GP20 FAM184
Other DBs
NCBI-ProteinID: AWB57679
UniProt: A0A2S0V0F1
Position
2036464..2037750
AA seq 428 aa
MLDPKLLRTDIENTAAELAKRGYTLDTAELMALEEQRKAIQMNTQDLQNQRNTRSKSIGQ
AKARGEDIQPLLAEVSKLGDELEAAKEEQTQVLAKIDFIASAIPNLIHESVPAGASEDDN
VEIKRWGTPREFDFEVKDHVDVATALDKGLDFESGAKLAGTRFAVMRGQIAKLHRALAQF
MLDVHSEEHGYQEMYVPYLVNHDSLYGTGQLPKFGEDLFHTELNNKKLSLIPTAEVPLTN
LVRDEIIEESDLPIKMCAHTPCFRSEAGSYGRDIRGLIRQHQFDKVEMVQIVKPEDSFQA
LEDLTGHAEKILEKLELPYRTVVLCTGDIGFSATKTFDIEVWLPAQNTYREISSCSNMGD
FQARRMQARYRSSESNKPELVHTLNGSGLAVGRTLVAVLENYQQADGSVNVPTVLQPYMK
GCTNINVG
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgcttgatccaaaactacttagaacagatatagaaaacaccgcagctgaacttgctaaa
cgtggatatacgttagataccgcagaactaatggcgttagaagagcaacgtaaagctatc
caaatgaatacgcaagacttacaaaaccagcgaaatactcgttctaaatctataggacaa
gctaaagcccgtggcgaagatattcagcctttattggccgaagtgagtaagctgggtgat
gagctagaagcggcaaaagaagaacaaactcaagtacttgcgaaaattgattttattgcc
tcagcaataccaaacttaattcatgagtcagtacctgccggtgctagcgaagacgacaac
gtagaaattaaacgttggggtacgccacgtgaatttgattttgaagtaaaagaccatgtt
gacgttgctacggcattagacaaaggcttagactttgaaagtggagcaaagcttgctggt
actcgtttcgccgttatgcgcggtcaaattgctaagttgcaccgtgcattagcccaattt
atgttagatgtgcatagcgaagagcacggctaccaagaaatgtacgtaccttacttagtc
aatcatgactctttatacggtacgggccaattacccaaatttggtgaagatttattccat
accgaattaaacaacaaaaagctttctttaattccaaccgctgaagtaccgttaactaac
ttagtgcgcgatgaaattatcgaagaaagtgacttgccaataaaaatgtgtgcacataca
ccgtgttttcgaagtgaagcaggttcttatggtagagacattcgcggcttgatccgccaa
catcaattcgacaaagttgaaatggtgcaaattgttaagccagaagactcttttcaagct
ttagaggacttaacgggtcatgcagaaaaaattcttgaaaaattagaattaccttatcgt
acagtagtgttgtgtacgggtgatattggttttagtgcaactaaaacgtttgatattgaa
gtatggcttcctgcgcaaaatacttaccgtgaaatttcttcttgttcaaatatgggcgat
ttccaagcacgtagaatgcaagcgagatatcgtagcagtgaaagcaataagccagaactt
gtacatacacttaatggctctggtcttgctgttggtcgtacgttagtagcggtacttgaa
aactaccaacaagcagatggtagcgttaacgtaccaaccgttttacaaccttatatgaaa
ggttgtactaacattaatgttggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system