KEGG   Colwellia sp. Arc7-D: DBO93_16625
Entry
DBO93_16625       CDS       T05422                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cola  Colwellia sp. Arc7-D
Pathway
cola03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DBO93_16625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cola03021]
    DBO93_16625
   03400 DNA repair and recombination proteins [BR:cola03400]
    DBO93_16625
Enzymes [BR:cola01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DBO93_16625
Transcription machinery [BR:cola03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DBO93_16625
DNA repair and recombination proteins [BR:cola03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DBO93_16625
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AWB59019
UniProt: A0A2S0V492
Position
complement(3856587..3857576)
AA seq 329 aa
MQGSVTEFLRPRLVDIETISATRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKGLAISLEGKNEAVLTLTKSGEGPVTAADIQHDGD
VEIANPTHVICHLTGDGSISMRIKVEMGRGYVPASARRDAEEEDRAIGRLLVDASFSPVV
RIAYDVDSARVEQRTDLDKLVLDMETNGTLDPEEAIRRASTILAEQLDAFVELRDVTEVE
PKEEKPLFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADND
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtaaccgaattccttagaccacgattggtagatattgaaactattagt
gctactcgtgctaaagtaactttagagccattagagcgtggttttggtcacactttaggt
aatgcgttacgccgcattcttttatcttcaatgccgggttgtgctgtaactgaagttgaa
attgacggtgtacttcatgagtacagcagtaaagaaggtgtgcaagaagacatcatcgaa
atactgttaaaccttaagggactagcgataagtttagaaggcaaaaatgaagctgttctt
accttaactaagtccggtgaaggccctgtaacggctgccgatatccaacatgatggtgat
gtagaaattgcaaacccaactcatgtaatctgtcatttgacaggtgatggttctatcagt
atgcgtataaaggttgaaatgggacgtggttatgttcctgcttcagctcgacgcgacgcc
gaggaagaagatcgtgcaattggacgtttgttagttgatgcttcattcagtccagttgta
agaattgcctatgatgttgattctgcacgtgttgaacagcgtacagatttggacaaactg
gtcttagacatggaaactaacggtacgttagatcctgaagaagcaattcgtcgcgcttca
acaattttagctgaacagctagatgcgtttgtagagcttcgtgatgtaactgaagttgaa
ccaaaagaggaaaaaccactgtttgatcctattttgcttcgtcctgttgatgaccttgaa
cttactgttcgttcagcaaactgcctaaaagcagaagcaattcaatatattggcgattta
gtacagcgtgctgaagttgagcttcttaaaacacctaatttaggtaagaagtctttaact
gaaatcaaagacgttttggcgtctcgtggtttgtctctaggtatgcgcctagaaaactgg
ccacctgaaagcatagctgataacgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system