KEGG   Colwellia sp. PAMC 21821: A3Q33_03345
Entry
A3Q33_03345       CDS       T04816                                 
Name
(GenBank) RNA helicase
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
Organism
colw  Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:colw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:colw03009]
    A3Q33_03345
Ribosome biogenesis [BR:colw03009]
 Prokaryotic type
  rRNA helicases
   A3Q33_03345
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Flav_NS3-hel_C AAA_22 P-loop_SecA
Other DBs
NCBI-ProteinID: ARD43425
Position
789326..790561
AA seq 411 aa
MFEQFDLDSALLGGIEKAGFKKPTSIQELVLPVAMTGKDVLASAPTGTGKTAAFLLPAAQ
HLLDYPRRGQGFPRVLILSPTRELAIQTHEQCEKLTALTDIKSAVITGGVNYGSHKEVLT
GHTDILVATPGRLMEYIESEQFDSREIEILILDEADRMLAMGFAETINRIVGEARWRKQT
MLFSATLEGAAVVRFSRELLNDPVFLEANPSRKEKAKIHQWMHLADDKDHKFALLMNILQ
QEEVERVLVFANKRETVQYLSGKLYAENMPCVWLEGKMQQDKRNTSVERLRNGTVNVLVA
TDVAERGLDIDDITHVINFDMPRTADIYLHRIGRTGRAGNKGTAISLVEAHDMTVIGKIE
RYIKERLPRRVIETLRPKYKEARVATKKTKVKRTVAQKKAKAKKMAKRTKS
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgtttgagcagtttgacctagattccgcgttattaggcggcattgaaaaagcaggcttt
aaaaagccaacgtctatccaagaattagtacttcctgttgctatgacaggcaaagacgta
ttagcttcagcccctacaggaaccggaaaaacagcggcgtttttactgcctgcggctcag
catttactcgattaccctcgacgaggccaaggttttccgcgtgtactaattttatcacca
acacgtgaacttgccatacaaacgcacgaacaatgtgagaaattaaccgcgctaaccgac
attaaatccgcggtaattaccggtggtgttaactacggcagtcacaaagaagtactgaca
ggtcataccgatattttggttgcaacacctggccgcttaatggaatacatagaaagcgag
cagtttgatagccgtgaaattgaaattcttattttagatgaagctgaccgtatgcttgca
atgggttttgctgaaaccattaatcgcattgttggcgaagcacgctggcgtaaacaaacc
atgctattttctgcaacactcgaaggtgctgccgtggttcgtttttctcgcgagctatta
aacgaccctgtatttttagaagctaacccttcgcgcaaagaaaaagcaaaaattcatcag
tggatgcatttagctgatgataaagatcataaattcgccttattgatgaacatattgcaa
caagaagaagttgagcgtgtacttgtttttgcaaataaacgcgaaacggtacagtatcta
tcaggtaaactttatgctgaaaacatgccttgtgtatggcttgaaggcaaaatgcaacaa
gataaacgtaacacctctgttgaacgtttacgcaatggtacggttaatgtacttgtagcg
accgatgttgctgaacgtgggcttgatattgacgatataacgcatgttataaactttgat
atgccgcgcactgctgatatttatttgcatcgcattggccgtacaggccgcgcgggcaac
aaaggtaccgctatttcactcgttgaagcacacgacatgaccgttataggtaaaattgag
cgctatataaaagagcgcctgccacgccgtgtgattgaaaccttaagaccgaagtacaaa
gaagcacgtgttgcgacgaaaaagaccaaagtgaaaagaactgtggcacaaaagaaagct
aaagcgaaaaaaatggcgaaacgaacaaaaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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