KEGG   Colwellia sp. PAMC 21821: A3Q33_05290
Entry
A3Q33_05290       CDS       T04816                                 
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
colw  Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:colw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:colw03009]
    A3Q33_05290
Enzymes [BR:colw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     A3Q33_05290
Ribosome biogenesis [BR:colw03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    A3Q33_05290
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ARD43772
Position
complement(1259925..1260635)
AA seq 236 aa
MALNKARLDRFLAQYCQISRKNVRLMLAQNRVFIDGIVAHNIDEIIDTFSLITLDGKVIQ
ENSAYYIMLNKPKGVVSATSDTKHQTVLDLLDYSFKHELHIVGRLDLNTSGLVLLTNDSR
WSERLTLPDKKVTKRYNVTLQNPLSEEYIAAFAQGMYFAFEDLTTKPAKLTVLSDYKAQV
ELIEGRYHQIKRMFGRFRNPVLALHRSSIGNLQLDGQLLEGQSRELTQSEINNIDQ
NT seq 711 nt   +upstreamnt  +downstreamnt
atggcgctaaataaagccaggctcgatcgatttttggctcaatattgtcaaatcagtcgc
aaaaatgtgcgactgatgttggcgcaaaatagagtgtttatcgatggcattgtcgcacat
aatattgatgaaattattgatacatttagccttataacgctagatggaaaggtgatacaa
gaaaactccgcctattatattatgctgaataagcctaaaggtgtagtcagcgcaacgagc
gatacaaagcaccaaacagtgcttgatttacttgattactcatttaagcatgagctacat
attgtgggccgtcttgaccttaatacctcagggttagtgctattaactaatgatagccgt
tggtcagaacgtttaactctgccagataaaaaagtcactaaacgttataacgtgactttg
caaaatccactaagcgaagaatatatagccgcttttgctcaggggatgtatttcgcgttt
gaggatctcactactaaacctgccaaattaaccgtgctttctgattataaggcccaagtt
gagcttattgaaggacgttaccaccaaattaagcgtatgttcggaaggtttcgtaacccg
gttttagctttgcaccgcagctcaatcggcaatttacaactcgacggtcaattgcttgaa
ggacaaagtagagagttaacgcagagtgaaattaataatattgatcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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