KEGG   Colwellia sp. PAMC 21821: A3Q33_16045
Entry
A3Q33_16045       CDS       T04816                                 
Name
(GenBank) tRNA pseudouridine synthase TruC
  KO
K06175  tRNA pseudouridine65 synthase [EC:5.4.99.26]
Organism
colw  Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:colw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:colw03016]
    A3Q33_16045
Enzymes [BR:colw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.26  tRNA pseudouridine65 synthase
     A3Q33_16045
Transfer RNA biogenesis [BR:colw03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    A3Q33_16045
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ARD45664
Position
3793085..3793843
AA seq 252 aa
MTIKNAGTVIVEKPVLKILYQDEYLVAVDKPAGLFVHRSFMDKDEIYFALQLLRDQIGQY
VYPLHRLDRPTSGVLLFALTQDVARLMGQAFSEREIQKTYYALTRGHLLGDGIIDYPLKE
KLDDLGDKNVSRDKEAQSATTNYQSVATASLPLPLGKYSSVRYSLIKCQPQTGRRHQIRR
HLAHLRHPIIGDINYGDNKQNPFFGEHFGFKRLMLIAKQVSFLHPVTAQTLTIEAEFDTQ
WQQVFSEFDWSY
NT seq 759 nt   +upstreamnt  +downstreamnt
atgacaattaaaaatgccggtacggtaattgttgaaaaacctgtattaaaaattttatat
caagatgagtacctagtcgcggttgataaacccgcgggacttttcgtccatcgtagcttt
atggacaaggatgaaatttactttgccttgcagcttttacgcgatcaaattggccaatat
gtttatcctttacatagacttgatagacccacatcaggtgttttgctctttgctttaacg
caagacgttgcgcgcttgatgggccaggcttttagcgagagagaaatacaaaaaacctac
tatgcgttaacacgaggccatttactaggtgatggtataattgactatccgctaaaagaa
aagcttgatgatttaggggataaaaatgttagtcgtgacaaagaagcgcaaagtgcaacc
actaattaccagtcggttgccacagcgtcattaccgttgccattaggtaagtattcaagc
gtccggtattcgttaattaaatgtcagccacaaactgggcgtcgtcatcaaattaggcgt
catctcgcgcatttacgtcatcccataatcggtgatataaattatggtgataataagcaa
aatccattttttggtgaacacttcggttttaagcgtttaatgctgatagctaaacaagtc
agttttctgcatccagttacagcgcaaacgttgacgattgaagctgaattcgatacccaa
tggcagcaagtatttagtgaatttgattggtcatactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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