KEGG   Commensalibacter melissae ESL0284: GN303_01105
Entry
GN303_01105       CDS       T06375                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
comm  Commensalibacter melissae ESL0284
Pathway
comm03410  Base excision repair
comm03430  Mismatch repair
comm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:comm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GN303_01105 (recJ)
   03430 Mismatch repair
    GN303_01105 (recJ)
   03440 Homologous recombination
    GN303_01105 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:comm03400]
    GN303_01105 (recJ)
DNA repair and recombination proteins [BR:comm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     GN303_01105 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     GN303_01105 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      GN303_01105 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: QGT67955
Position
complement(260346..262151)
AA seq 601 aa
MSETSSLVLNVSQSLSGRQWVWRHSSLDQHFLDRQAQAIAQKASLFEVVGRMMALRGVSA
ENLPFFLSPTLKALLPNPSCLKDMDKAAARIADAIINHEKIAIFGDYDVDGGCATALFSD
FFSMLGNQAISYIPDRFKEGYGPNVQALEQLIQQGATLIICVDCGTAAHSVFDQINQEKT
DLIVFDHHKSEIVPNIYATVNPNRLDCTSRLGNLCAGGVSFIASIAITRNLREKNYFQTN
PEPNLFKLMDLVALSTICDVMPLTGLNRAFVTQGLKILAKRERIGLAALLDVAGITQVPN
AFSCGFALGPRINAGGRISEASLGLQLLTNSNPFDARLIAERLDTINKQRQNIEKDVLDQ
ATEQAMEQYRQGNAVIMLSNPKWHSGIVGIVAGRIKEQINRPILIGTELQDGTVKGSGRS
VPGLDLGAAIIAAKQADLLIQGGGHTMAAGYCYHKDKSQKLHDFLNHYLNQATHYPTVAD
LEIETVITPAGASVELAKQIENLAPFGNGNEEPLIVLSYVHIIRTDRIGKDGNTLRLIIQ
GEERQSLKALLFRADQNPITVFLEDSQNRRPVHLAGWLRNNQWNGKENTTFFIKDASFIK
N
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtcggaaacctcttctctagtccttaatgtcagtcaaagtctttcaggacgccagtgg
gtatggcgtcattcttctctggaccagcattttctggatcgtcaggcacaagcgattgct
cagaaagcttcccttttcgaggttgttggtcgcatgatggcattaagaggggtttccgcg
gaaaatttgcctttttttttatccccaacccttaaagcattactccccaatccctcttgt
ttaaaagatatggacaaagcggcagcacgtattgccgatgccataattaaccatgagaaa
attgccatatttggcgattatgatgtagatggtggctgtgccacagccctgtttagcgat
tttttttccatgctgggaaatcaagccatttcatacattccagatcgtttcaaggaaggt
tatggtccaaatgtgcaagcgctggaacagcttattcaacaaggggcaacccttatcatc
tgtgtcgattgtggaaccgcagctcattccgtttttgatcagattaatcaggaaaaaaca
gaccttatcgtttttgaccaccataaatcagagatcgttcccaatatttatgcaaccgtc
aatcctaatcgtttagactgcacatccagactaggcaatctttgtgccggtggagtaagc
tttattgcatccattgcaattacccgaaatctgcgggaaaaaaattattttcaaaccaac
cctgaacctaatctttttaaattaatggatctcgtcgctttatcgacaatttgtgacgtt
atgcctttgacaggcttaaatagagcctttgtcacgcaaggcttgaaaatcctagcaaaa
cgtgaacgtatagggttggctgccttattggatgttgctggaattacgcaagtacccaac
gcctttagttgcggattcgcattaggtccgagaattaatgctggtggacgtatttccgaa
gcaagtcttggattacagcttttaacgaactctaacccctttgatgcaagactgattgcc
gagcgtctggataccatcaataaacaacggcagaatattgaaaaagatgtattggatcag
gccaccgaacaagcaatggaacaatatagacaaggtaatgccgtcattatgcttagcaat
ccaaaatggcattccggtatcgttggcattgttgcaggccgcatcaaggaacaaatcaac
cgtccaattttaatcgggacagaactacaggatggcaccgtcaaaggctctggccggtct
gttcctggcctagatttgggagccgctattatcgcagcaaaacaggctgatttattaatc
cagggaggaggtcatacaatggccgccggttattgctatcataaagacaaaagccagaaa
ttacacgattttcttaatcattatttaaaccaggccactcattatccgactgtcgcagat
ttagaaattgaaaccgtcatcactccagcaggagcctccgttgaactggccaaacagatt
gaaaatctggctccctttggaaatggaaatgaagaacccctcattgtcctgtcttatgta
cacattatccgtacggacaggataggcaaagatgggaataccttacggttaatcattcag
ggagaagaaagacaatccttaaaagcccttctcttccgtgcagatcagaatccgataact
gtattcttagaagattctcaaaaccggcgacctgttcatttggcaggatggttacgtaac
aatcaatggaatggaaaggaaaatacaactttttttataaaagatgcaagttttataaaa
aattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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